RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CT45A9P0DMV2 189 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 FCGR2AP12318 317 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GNRHRP30968 328 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF84P51523 738 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 SLC26A5P58743 744 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 TAS2R19P59542 299 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 NANOS3P60323 173 aaKnown RBP11.18□□□□□ -0.62
SCN3B-206ENST00000530277 HERV-K104P61576 105 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 MFSD13AQ14CX5 517 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GAB4Q2WGN9 574 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 CT45A2Q5DJT8 189 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 RHBDD1Q8TEB9 315 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 WDFY2Q96P53 400 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 VN1R1Q9GZP7 353 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 ACAD8Q9UKU7 415 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF205O95201 554 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 GAAP10253 952 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 RPA2P15927 270 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 DPP4P27487 766 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 BDKRB2P30411 391 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 SEC61A1P61619 476 aaKnown RBP11.17□□□□□ -0.62
SCN3B-206ENST00000530277 C17orf67Q0P5P2 114 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 FOXF1Q12946 379 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 GLIPR1L1Q6UWM5 242 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 FAM71CQ8NEG0 241 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 OR51A2Q8NGJ7 313 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 PIGCQ92535 297 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 YIPF5Q969M3 257 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 VWCEQ96DN2 955 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 DSPPQ9NZW4 1301 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 NAP1L6A6NFF2 107 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 SSX5O60225 188 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 SCGNO76038 276 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 CD79AP11912 226 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 HLA-DOBP13765 273 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 ABOP16442 354 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 NUDT1P36639 197 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 DCDP81605 110 aaKnown RBP11.17□□□□□ -0.62
SCN3B-206ENST00000530277 HSF1Q00613 529 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 LINC00696Q6ZRV3 163 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 GRINAQ7Z429 371 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 OR4K15Q8NH41 348 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 VSTM2LQ96N03 204 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 PILRAQ9UKJ1 303 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 TEX51A0A1B0GUA7 166 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 OR7C1O76099 320 aaPredicted RBP11.17□□□□□ -0.62
SCN3B-206ENST00000530277 AVPR2P30518 371 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 OPRM1P35372 400 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 RAP2BP61225 183 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 GK2Q14410 553 aaPredicted RBP11.17□□□□□ -0.62
SCN3B-206ENST00000530277 INPP5JQ15735 1006 aaPredicted RBP11.17□□□□□ -0.62
SCN3B-206ENST00000530277 SFRP5Q5T4F7 317 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 HAGHLQ6PII5 290 aaPredicted RBP11.17□□□□□ -0.62
SCN3B-206ENST00000530277 HAVCR2Q8TDQ0 301 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 GNRHR2Q96P88 292 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 TSPAN32Q96QS1 320 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 TMEM59Q9BXS4 323 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 MRPS28Q9Y2Q9 187 aaKnown RBP11.17□□□□□ -0.62
SCN3B-206ENST00000530277 KLHDC2Q9Y2U9 406 aa11.17□□□□□ -0.62
SCN3B-206ENST00000530277 SCN8AQ9UQD0 1980 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 NSG1A0A0A6YYJ2 146 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 FOXS1O43638 330 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 PRAF2O60831 178 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 ADAM11O75078 769 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 OMGP23515 440 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 SELENOPP49908 381 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 FAM76BQ5HYJ3 339 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 H1FNTQ75WM6 255 aaPredicted RBP11.16□□□□□ -0.62
SCN3B-206ENST00000530277 GPBAR1Q8TDU6 330 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 SMIM4Q8WVI0 70 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 WDR89Q96FK6 387 aaPredicted RBP11.16□□□□□ -0.62
SCN3B-206ENST00000530277 SLC22A11Q9NSA0 550 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 PRR13Q9NZ81 148 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 MBD2Q9UBB5 411 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 SRPK3Q9UPE1 567 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 LOC100289279A0A1B0GTE1 492 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 CXorf51AA0A1B0GTR3 108 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 CNOT4O95628 575 aaKnown RBP11.16□□□□□ -0.62
SCN3B-206ENST00000530277 NAT2P11245 290 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 ACHEP22303 614 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 MANEAQ5SRI9 462 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 CD276Q5ZPR3 534 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 CREB3L2Q70SY1 520 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 OVCH1Q7RTY7 1134 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF679Q8IYX0 411 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 SYS1Q8N2H4 156 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 NPEPL1Q8NDH3 523 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 IL1F10Q8WWZ1 152 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 RAB3CQ96E17 227 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 SLC5A7Q9GZV3 580 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 ISYNA1Q9NPH2 558 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 MRM2Q9UI43 246 aaKnown RBP11.16□□□□□ -0.62
SCN3B-206ENST00000530277 SIT1Q9Y3P8 196 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 MED13LQ71F56 2210 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 MEX3AA1L020 520 aaKnown RBP11.16□□□□□ -0.62
SCN3B-206ENST00000530277 A6NIZ1 184 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 LDOC1O95751 146 aaPredicted RBP11.16□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF250P15622 560 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 CAV2P51636 162 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms