RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 FAM157CP0CG43 387 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 SDC1P18827 310 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 GGT1P19440 569 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 GCAP28676 217 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 SHC1P29353 583 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 HPCAL1P37235 193 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 FRKP42685 505 aaPredicted RBP4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 ASMTP46597 345 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 OR3A2P47893 321 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 DNAJB13P59910 316 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 ERVFC1-1P60608 527 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 SNRPEP62304 92 aaKnown RBP4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF117Q03924 483 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 PDE7AQ13946 482 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 LASP1Q14847 261 aaKnown RBP4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 KIAA0040Q15053 153 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 CCDC153Q494R4 210 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 TIMM23BQ5SRD1 257 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 C3orf33Q6P1S2 294 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 Q6ZT83 130 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 P2RY8Q86VZ1 359 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF100Q8IYN0 542 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF614Q8N883 585 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 CCDC63Q8NA47 563 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 NHLRC2Q8NBF2 726 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 POC1AQ8NBT0 407 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 MTERF3Q96E29 417 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 OTUB1Q96FW1 271 aaPredicted RBP4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 C16orf58Q96GQ5 468 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 ATP6V0BQ99437 205 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 SEPHS2Q99611 448 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 WNT5BQ9H1J7 359 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 COQ10BQ9H8M1 238 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 ZCCHC3Q9NUD5 404 aaKnown RBP4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 GIN1Q9NXP7 522 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 POU2F3Q9UKI9 436 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 ICAM5Q9UMF0 924 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 FAF1Q9UNN5 650 aaPredicted RBP4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 MGAT4BQ9UQ53 548 aa4.38□□□□□ -1.71
AMBRA1-209ENST00000529963 IGHV4-30-2A0A087WSY4 118 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 IGHV3-15A0A0B4J1V0 119 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 A0A1B0GUV1 79 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF724A8MTY0 619 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 TMEM114B3SHH9 223 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 SHISA9B4DS77 424 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 G3V2L1 256 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 TRIM77I1YAP6 450 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 SLC33A1O00400 549 aaPredicted RBP4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 ABCD4O14678 606 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 AZIN1O14977 448 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 RIPK2O43353 540 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 EIF4E2O60573 245 aaKnown RBP4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 PLIN3O60664 434 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CYTIPO60759 359 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 RAMP1O60894 148 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CD8AP01732 235 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 HMGN2P05204 90 aaKnown RBP4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 SLC25A16P16260 332 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 COX5AP20674 150 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 EFNA1P20827 205 aaPredicted RBP4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CCR4P51679 360 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 ATP12AP54707 1039 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 STX1BP61266 288 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 RPL38P63173 70 aaKnown RBP4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 RASGEF1BQ0VAM2 473 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 MELKQ14680 651 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 TMEM249Q2WGJ8 235 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 KLHL26Q53HC5 615 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 FAM76BQ5HYJ3 339 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 DCST2Q5T1A1 773 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 C6orf52Q5T4I8 152 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CLEC6AQ6EIG7 209 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CBLN3Q6UW01 205 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 DNM1P46Q6ZS02 220 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 RNF165Q6ZSG1 346 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 Q6ZSR9 355 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 NR2C2APQ86WQ0 139 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 NATD1Q8N6N6 113 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 NOA1Q8NC60 698 aaKnown RBP4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 PAPD5Q8NDF8 572 aaKnown RBP4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 OR5W2Q8NH69 310 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CLHC1Q8NHS4 586 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 THAP6Q8TBB0 222 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 GPR119Q8TDV5 335 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CDS1Q92903 461 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 SLAMF9Q96A28 289 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 FCRL1Q96LA6 429 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 OR5B2Q96R09 309 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 TNFRSF13CQ96RJ3 184 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 KLHDC3Q9BQ90 382 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 PSD2Q9BQI7 771 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CACNG6Q9BXT2 260 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 BEX2Q9BXY8 128 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 SEMA6AQ9H2E6 1030 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 PIGUQ9H490 435 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 EVA1AQ9H8M9 152 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 SERINC1Q9NRX5 453 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 EMC3Q9P0I2 261 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 TBK1Q9UHD2 729 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 EMCNQ9ULC0 261 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms