RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 GTF2H4Q92759 462 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 NEIL1Q96FI4 390 aaPredicted RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 MPP4Q96JB8 637 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 C4orf45Q96LM5 186 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 OR8B2Q96RD0 313 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 PAIP2Q9BPZ3 127 aaKnown RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 NUDT16L1Q9BRJ7 211 aaKnown RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 MRPL13Q9BYD1 178 aaKnown RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 CHIAQ9BZP6 476 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 OR2H1Q9GZK4 316 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 PAIP1Q9H074 479 aaKnown RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 SMURF2Q9HAU4 748 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 SSU72Q9NP77 194 aaKnown RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 KCNK9Q9NPC2 374 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 SDR39U1Q9NRG7 319 aaPredicted RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 ASH2LQ9UBL3 628 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 TIMM10BQ9Y5J6 103 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 POMT1Q9Y6A1 747 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 PRKDCP78527 4128 aaKnown RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 TRAPPC13A5PLN9 417 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 LRRC30A6NM36 301 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 CPSF4LA6NMK7 179 aaKnown RBP7.52□□□□□ -1.21
VPS11-203ENST00000529545 EVPLLA8MZ36 301 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 TMEM178BH3BS89 294 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 UBDO15205 165 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 RGS16O15492 202 aaPredicted RBP7.52□□□□□ -1.21
VPS11-203ENST00000529545 TPST2O60704 377 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 ICMTO60725 284 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 ABHD16AO95870 558 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 F13BP05160 661 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 ASAH2BP0C7U1 165 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 KITP10721 976 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 AQP1P29972 269 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 ZNF133P52736 654 aaPredicted RBP7.52□□□□□ -1.21
VPS11-203ENST00000529545 UGT2B15P54855 530 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 PAX2Q02962 417 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 C2orf68Q2NKX9 166 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 KRT71Q3SY84 523 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 ENTPD8Q5MY95 495 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 FAM27BQ5VT28 67 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 SLC27A4Q6P1M0 643 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 SLC2A7Q6PXP3 512 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 KLBQ86Z14 1044 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 ATG16L2Q8NAA4 619 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 FAM110DQ8TAY7 271 aaPredicted RBP7.52□□□□□ -1.21
VPS11-203ENST00000529545 SSMEM1Q8WWF3 244 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 ASB10Q8WXI3 467 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 DYRK2Q92630 601 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 RBP7Q96R05 134 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 OR2V2Q96R30 315 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 SIGLEC11Q96RL6 698 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 SEPHS2Q99611 448 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 TMEM38AQ9H6F2 299 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 INIPQ9NRY2 104 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 THAP1Q9NVV9 213 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 CLN8Q9UBY8 286 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 NDRG4Q9ULP0 352 aaKnown RBP7.52□□□□□ -1.21
VPS11-203ENST00000529545 CORO2BQ9UQ03 480 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 ANGPT4Q9Y264 503 aa7.52□□□□□ -1.21
VPS11-203ENST00000529545 DOCK11Q5JSL3 2073 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 M0R3H8 397 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 DYNC1I1O14576 645 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 CLPXO76031 633 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 SLC2A10O95528 541 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 MELTFP08582 738 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 CST2P09228 141 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 LAP3P28838 519 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 PITPNBP48739 271 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 STX1BP61266 288 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 FGF12P61328 243 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 RPL18Q07020 188 aaKnown RBP7.51□□□□□ -1.21
VPS11-203ENST00000529545 HNRNPA0Q13151 305 aaKnown RBP7.51□□□□□ -1.21
VPS11-203ENST00000529545 NPTX1Q15818 432 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 C1orf87Q8N0U7 546 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 SMYD1Q8NB12 490 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 OR9I1Q8NGQ6 314 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 LINC01006Q8NI28 216 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 FNDC8Q8TC99 324 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 ADAMTS16Q8TE57 1224 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 NABP1Q96AH0 204 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 CMBLQ96DG6 245 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 COG8Q96MW5 612 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 WFDC6Q9BQY6 131 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 TMEM109Q9BVC6 243 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 WNT5BQ9H1J7 359 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 TMEM165Q9HC07 324 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 GCM1Q9NP62 436 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 TBCCD1Q9NVR7 557 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 SLC7A7Q9UM01 511 aa7.51□□□□□ -1.21
VPS11-203ENST00000529545 C12orf71A8MTZ7 269 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 P2RY10O00398 339 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 PIN1P1O15428 100 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 ENSAO43768 121 aaKnown RBP7.5□□□□□ -1.21
VPS11-203ENST00000529545 ZNF205O95201 554 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 TSPAN15O95858 294 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 CSF1P09603 554 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 IRF2P14316 349 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 FUT1P19526 365 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 CD247P20963 164 aa7.5□□□□□ -1.21
VPS11-203ENST00000529545 KITLGP21583 273 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms