RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 GALK2Q01415 458 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 HSF2Q03933 536 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 GLO1Q04760 184 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 TSPAN31Q12999 210 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 CARTPTQ16568 116 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 KRTAP27-1Q3LI81 207 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 LYPD4Q6UWN0 246 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 RRM2BQ7LG56 351 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 SYT9Q86SS6 491 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 SLC26A10Q8NG04 563 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 OR1J1Q8NGS3 322 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 OR4K13Q8NH42 304 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 SYNPRQ8TBG9 265 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 FANK1Q8TC84 345 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 FNDC8Q8TC99 324 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 KLF14Q8TD94 323 aaPredicted RBP9.08□□□□□ -0.96
CD44-227ENST00000528086 C1orf159Q96HA4 380 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 ERMAPQ96PL5 475 aaPredicted RBP9.08□□□□□ -0.96
CD44-227ENST00000528086 C1orf198Q9H425 327 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 DYNLRB1Q9NP97 96 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 CCNB1IP1Q9NPC3 277 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 PNRC2Q9NPJ4 139 aaKnown RBP9.08□□□□□ -0.96
CD44-227ENST00000528086 MRPL22Q9NWU5 206 aaKnown RBP9.08□□□□□ -0.96
CD44-227ENST00000528086 AURKCQ9UQB9 309 aa9.08□□□□□ -0.96
CD44-227ENST00000528086 C5orf63A6NC05 138 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 A8MV72 311 aaPredicted RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 OR10H3O60404 316 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 ENTPD5O75356 428 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 KHDRBS3O75525 346 aaKnown RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 LCKP06239 509 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 IGFBP5P24593 272 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 APLNRP35414 380 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 GGT2P36268 569 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 GDI2P50395 445 aaKnown RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 KLF3P57682 345 aaPredicted RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 PPP1CBP62140 327 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 RPS23P62266 143 aaKnown RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 MXRA7P84157 204 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 PLP2Q04941 152 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 PSG7Q13046 419 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 MBNL2Q5VZF2 373 aaKnown RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 CORO6Q6QEF8 472 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 Q6ZR03 302 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 ADCK1Q86TW2 530 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 ZBTB46Q86UZ6 589 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 DHFR2Q86XF0 187 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 GLB1L2Q8IW92 636 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 ARHGAP24Q8N264 748 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 OR10S1Q8NGN2 331 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 OR1J2Q8NGS2 313 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 OR4Q3Q8NH05 313 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 GNPDA2Q8TDQ7 276 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 C4orf45Q96LM5 186 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 PIMREGQ9BSJ6 248 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 TRIM15Q9C019 465 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 C1orf21Q9H246 121 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 MYOZ1Q9NP98 299 aaPredicted RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 HINT3Q9NQE9 182 aaKnown RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 ZNF275Q9NSD4 429 aaPredicted RBP9.07□□□□□ -0.96
CD44-227ENST00000528086 DCAF16Q9NXF7 216 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 NDE1Q9NXR1 346 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 IL20Q9NYY1 176 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 ASH2LQ9UBL3 628 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 STARD10Q9Y365 291 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 SPEF1Q9Y4P9 236 aa9.07□□□□□ -0.96
CD44-227ENST00000528086 WNK2Q9Y3S1 2297 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 C12orf71A8MTZ7 269 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 TNFRSF11BO00300 401 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 XKRYO14609 159 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 GMNNO75496 209 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 KRT36O76013 467 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 PTHP01270 115 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 IGHV1-46P01743 117 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 COX5BP10606 129 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 NR2C1P13056 603 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 SLC6A6P31641 620 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 RAD52P43351 418 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 MNAT1P51948 309 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 SMIM11AP58511 58 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 LMO4P61968 165 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 LSM6P62312 80 aaKnown RBP9.06□□□□□ -0.96
CD44-227ENST00000528086 CCL8P80075 99 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 CLEC12AQ5QGZ9 265 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 SLC35F1Q5T1Q4 408 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 CYB5R2Q6BCY4 276 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 LEG1Q6P5S2 330 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 CFAP77Q6ZQR2 320 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 TRPM8Q7Z2W7 1104 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 NAA40Q86UY6 237 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 CYB561A3Q8NBI2 242 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 SDR9C7Q8NEX9 313 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 ABHD4Q8TB40 342 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 MCUR1Q96AQ8 359 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 SLCO4A1Q96BD0 722 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 CCDC124Q96CT7 223 aaKnown RBP9.06□□□□□ -0.96
CD44-227ENST00000528086 ASB9Q96DX5 294 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 SNX18Q96RF0 628 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 THTPAQ9BU02 230 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 BCL2L14Q9BZR8 327 aa9.06□□□□□ -0.96
CD44-227ENST00000528086 MS4A5Q9H3V2 200 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms