RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 LCTLQ6UWM7 567 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ZNF621Q6ZSS3 439 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 PRSS45Q7RTY3 260 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CEACAM19Q7Z692 300 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SLC35E3Q7Z769 313 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SCD5Q86SK9 330 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 GLB1L2Q8IW92 636 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ZNF100Q8IYN0 542 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 H1FOOQ8IZA3 346 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 PAQR4Q8N4S7 273 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 LFNGQ8NES3 379 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 OR13C2Q8NGS9 318 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 OR1P1Q8NH06 330 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 OR51F2Q8NH61 342 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 OR5AK2Q8NH90 309 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SFXN5Q8TD22 340 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CD200R1Q8TD46 325 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CD300LFQ8TDQ1 290 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CSGALNACT1Q8TDX6 532 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 TMEM234Q8WY98 164 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SMARCD2Q92925 531 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 NINJ1Q92982 152 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 TMEM18Q96B42 140 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 S100A16Q96FQ6 103 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 ACY3Q96HD9 319 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 PGAM5Q96HS1 289 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SLC35E1Q96K37 410 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 OR8B4Q96RC9 309 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 GPR21Q99679 349 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SLC25A21Q9BQT8 299 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 TBL1XR1Q9BZK7 514 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 DEFB129Q9H1M3 183 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SLC35B3Q9H1N7 401 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 OR10A5Q9H207 317 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 P2RY12Q9H244 342 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 NELFAQ9H3P2 528 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SLC2A9Q9NRM0 540 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CYTL1Q9NRR1 136 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 MRPL15Q9P015 296 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 RNF181Q9P0P0 153 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 USP36Q9P275 1121 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 ZNF223Q9UK11 482 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 ADAM29Q9UKF5 820 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 JAG2Q9Y219 1238 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 OSGIN2Q9Y236 505 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 FARSAQ9Y285 508 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 AMDHD2Q9Y303 409 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 RBM7Q9Y580 266 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 PRSS21Q9Y6M0 314 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ALPK3Q96L96 1907 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 LOC285556D6RIA3 1793 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TRAV30A0A087WSZ9 112 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 A0A1B0GV72 72 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TRBC2A0A5B9 178 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 DHRS7CA6NNS2 312 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 B4DEV8 164 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 C9JQL5 133 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 F6UZH7 168 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 K7ERU9 68 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SMAD9O15198 467 aaKnown RBP5.25□□□□□ -1.57
CD44-225ENST00000527326 SOX14O95416 240 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TSPAN15O95858 294 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TRGC2P03986 189 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 LCATP04180 440 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 H1F0P07305 194 aaKnown RBP5.25□□□□□ -1.57
CD44-225ENST00000527326 CTSLP07711 333 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 HOXC6P09630 235 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SLC35G6P0C7Q6 338 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ELFN1P0C7U0 828 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 AKAIN1P0CW23 69 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 CALCBP10092 127 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 PNLIPP16233 465 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ATF1P18846 271 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 GNRHRP30968 328 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SNCAP37840 140 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 PTH2RP49190 550 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 RPL34P49207 117 aaKnown RBP5.25□□□□□ -1.57
CD44-225ENST00000527326 NPY4RP50391 375 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 BACE1P56817 501 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 CLDN18P56856 261 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SELENOVP59797 346 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 IRF8Q02556 426 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TNFAIP1Q13829 316 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 CBFBQ13951 182 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ARL6IP1Q15041 203 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 PSG3Q16557 428 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 BEX5Q5H9J7 111 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ZNF311Q5JNZ3 666 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TMEM69Q5SWH9 247 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 PRAMEF17Q5VTA0 474 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 YOD1Q5VVQ6 348 aaPredicted RBP5.25□□□□□ -1.57
CD44-225ENST00000527326 METRNLQ641Q3 311 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ANKRD16Q6P6B7 361 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TEX38Q6PEX7 206 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SLC23A3Q6PIS1 610 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ZNF836Q6ZNA1 936 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TTLL10Q6ZVT0 673 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 FAM214BQ7L5A3 538 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TCF24Q7RTU0 167 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 BCDIN3DQ7Z5W3 292 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms