RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 APLNRP35414 380 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 SELENOVP59797 346 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 PPP1CBP62140 327 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 HSF2Q03933 536 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF718Q3SXZ3 478 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 RABL3Q5HYI8 236 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 FAM27BQ5VT28 67 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 OTPQ5XKR4 325 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF774Q6NX45 483 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 C16orf89Q6UX73 402 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 CALHM3Q86XJ0 350 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 TEX29Q8N6K0 151 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF283Q8N7M2 679 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 OR10A6Q8NH74 314 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 ABHD4Q8TB40 342 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 POP5Q969H6 163 aaKnown RBP11.99□□□□□ -0.49
CPSF1-201ENST00000526271 SLC7A6OSQ96CW6 309 aaPredicted RBP11.99□□□□□ -0.49
CPSF1-201ENST00000526271 TIMD4Q96H15 378 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 MPP4Q96JB8 637 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 EVA1AQ9H8M9 152 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 NTN4Q9HB63 628 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 PATZ1Q9HBE1 687 aaKnown RBP11.99□□□□□ -0.49
CPSF1-201ENST00000526271 INIPQ9NRY2 104 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 PLEK2Q9NYT0 353 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 SLC13A4Q9UKG4 626 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 NUP50Q9UKX7 468 aa11.99□□□□□ -0.49
CPSF1-201ENST00000526271 PTHP01270 115 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 IGHMP01871 453 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 SBK2P0C263 348 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 THRBP10828 461 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 UMPSP11172 480 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 PLP2Q04941 152 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 PAX8Q06710 450 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 SGCAQ16586 387 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 CCDC80Q76M96 950 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 LRRC28Q86X40 367 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-201ENST00000526271 ECSITQ9BQ95 431 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 SPAG4Q9NPE6 437 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 TMEM106BQ9NUM4 274 aa11.98□□□□□ -0.49
CPSF1-201ENST00000526271 NME4O00746 187 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 FOXH1O75593 365 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 MT-ND5P03915 603 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF26P17031 533 aaPredicted RBP11.97□□□□□ -0.49
CPSF1-201ENST00000526271 FPR2P25090 351 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF84P51523 738 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 SLC7A2P52569 658 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 MXRA7P84157 204 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 PIN1Q13526 163 aaPredicted RBP11.97□□□□□ -0.49
CPSF1-201ENST00000526271 LEG1Q6P5S2 330 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 IGFN1Q86VF2 1251 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 DEFB107AQ8IZN7 70 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 ITLN1Q8WWA0 313 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 CDRT15Q96T59 188 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 BTBD10Q9BSF8 475 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 SMURF2Q9HAU4 748 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 CD300AQ9UGN4 299 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 AUP1Q9Y679 476 aa11.97□□□□□ -0.49
CPSF1-201ENST00000526271 A0A1W2PRG6 482 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 NPIPB13A6NJU9 1138 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 CEACAM18A8MTB9 384 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 NPIPB4C9JG80 1138 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 CLDN34H7C241 214 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 IMPA2O14732 288 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 PLATP00750 562 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 CST2P09228 141 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 OMGP23515 440 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 GCH1P30793 250 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 GDI2P50395 445 aaKnown RBP11.96□□□□□ -0.49
CPSF1-201ENST00000526271 TNFAIP6P98066 277 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-201ENST00000526271 HOXA4Q00056 320 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-201ENST00000526271 RELBQ01201 579 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 LIPEQ05469 1076 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 BAMBIQ13145 260 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 CYP51A1Q16850 503 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 SPATS1Q496A3 300 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 TMEM155Q4W5P6 130 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 MTX3Q5HYI7 312 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 CCDC121Q6ZUS5 278 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 C9orf139Q6ZV77 190 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 SLC7A6Q92536 515 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 SGTBQ96EQ0 304 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 C4orf45Q96LM5 186 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 LRMDAQ9H2I8 198 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 TXNIPQ9H3M7 391 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 EMC7Q9NPA0 242 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 CCNB1IP1Q9NPC3 277 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 PDP1Q9P0J1 537 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-201ENST00000526271 RIMS3Q9UJD0 308 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 HIF3AQ9Y2N7 669 aa11.96□□□□□ -0.49
CPSF1-201ENST00000526271 FAM220BPB1ANY3 271 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 MCIDASD6RGH6 385 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 H7C1C5 153 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 ZNF205O95201 554 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 IGF2P01344 180 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 HIST1H2ABP04908 130 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 WNT2P09544 360 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 HSD17B1P14061 328 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 KITLGP21583 273 aa11.95□□□□□ -0.5
CPSF1-201ENST00000526271 PMELP40967 661 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms