RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 XPNPEP2O43895 674 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 MPZL2O60487 215 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 RAMP1O60894 148 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 FAM20BO75063 409 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 CLIC3O95833 236 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 SERPINB2P05120 415 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 ISG15P05161 165 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 HOXD4P09016 255 aaPredicted RBP3.81□□□□□ -1.8
CD44-213ENST00000525209 HOXB7P09629 217 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 UCHL3P15374 230 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 CSNK2A2P19784 350 aaPredicted RBP3.81□□□□□ -1.8
CD44-213ENST00000525209 PI3P19957 117 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 HOXA5P20719 270 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 FUT3P21217 361 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 NR4A1P22736 598 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 GNRHRP30968 328 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 DCTP40126 519 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 TFPI2P48307 235 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 OR10A3P58181 314 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 DCDC1P59894 354 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 FAM3AP98173 230 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 HMGCS1Q01581 520 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 TNFRSF9Q07011 255 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 ARL16Q0P5N6 197 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 CRHR2Q13324 411 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 OR5I1Q13606 314 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 OXA1LQ15070 435 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 TRIM16LQ309B1 348 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 CCDC58Q4VC31 144 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 ASPRV1Q53RT3 343 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 SPANXN4Q5MJ08 99 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 FNBP1LQ5T0N5 605 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 MARC1Q5VT66 337 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 SAXO2Q658L1 398 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 ZNF530Q6P9A1 599 aaPredicted RBP3.81□□□□□ -1.8
CD44-213ENST00000525209 CD200R1LQ6Q8B3 271 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 Q6ZSN1 163 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 FAM92BQ6ZTR7 304 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 FAM19A1Q7Z5A9 133 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 OR4N5Q8IXE1 308 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 STK40Q8N2I9 435 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 PRELID2Q8N945 189 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 SLC37A3Q8NCC5 494 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 OR2T12Q8NG77 320 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 OSR1Q8TAX0 266 aaPredicted RBP3.81□□□□□ -1.8
CD44-213ENST00000525209 RNF138Q8WVD3 245 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 TFB1MQ8WVM0 346 aaKnown RBP3.81□□□□□ -1.8
CD44-213ENST00000525209 RAB3CQ96E17 227 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 Q96MT0 163 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 SDHCQ99643 169 aaPredicted RBP3.81□□□□□ -1.8
CD44-213ENST00000525209 TMEM59Q9BXS4 323 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 UBXN6Q9BZV1 441 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 ARL6Q9H0F7 186 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 TLNRD1Q9H1K6 362 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 OR51B5Q9H339 312 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 CWH43Q9H720 699 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 CAB39LQ9H9S4 337 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 Q9HAA7 133 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 ZDHHC4Q9NPG8 344 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 DDX19AQ9NUU7 478 aaKnown RBP3.81□□□□□ -1.8
CD44-213ENST00000525209 TMEM45AQ9NWC5 275 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 C19orf25Q9UFG5 118 aaPredicted RBP3.81□□□□□ -1.8
CD44-213ENST00000525209 ENOPH1Q9UHY7 261 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 MGAT4AQ9UM21 535 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 ACOT9Q9Y305 439 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 OR2W1Q9Y3N9 320 aa3.81□□□□□ -1.8
CD44-213ENST00000525209 CDC42BPGQ6DT37 1551 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OVOS2A0A0G2JMS6 1433 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OVOS2A0A0J9YW53 1432 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OVOS2Q6IE36 1432 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 FLT4P35916 1363 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 KIF24Q5T7B8 1368 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 SBF2Q86WG5 1849 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 KIR2DS1A0A191URI9 304 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 SMIM28A0A1B0GU29 152 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 hCG_38984A0A1B0GV85 526 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 PRR23AA6NEV1 266 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 ZNF233A6NK53 670 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 B8ZZF3 427 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 TCP10L2B9ZVM9 353 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 PRSS44E7EML9 344 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 E9PAM4 449 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 INPP4BO15327 924 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 BIRC5O15392 142 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 FOXS1O43638 330 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 ENSAO43768 121 aaKnown RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 PRKNO60260 465 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 CDC40O60508 579 aaKnown RBP eCLIP3.8□□□□□ -1.8
CD44-213ENST00000525209 MAGEC1O60732 1142 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 LSM8O95777 96 aaKnown RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 IFNA2P01563 188 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 IFNA16P05015 189 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 C2P06681 752 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 GUSBP08236 651 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 CCDC166P0CW27 439 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 IGFBP3P17936 291 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 EFNA1P20827 205 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 FGF9P31371 208 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 SLCO1A2P46721 670 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms