RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 LY6G6DO95868 133 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 GAAP10253 952 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 CCL2P13500 99 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 GIFP27352 417 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 KLF3P57682 345 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 HIST1H3AP68431 136 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 HIST2H3PS2Q5TEC6 136 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 UGT2A3Q6UWM9 527 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 HIST2H3AQ71DI3 136 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR6V1Q8N148 313 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 NPEPL1Q8NDH3 523 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 AKR7LQ8NHP1 331 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 SYNPRQ8TBG9 265 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 SMR3AQ99954 134 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 EGLN3Q9H6Z9 239 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 EMC7Q9NPA0 242 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 TBCCD1Q9NVR7 557 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 REV1Q9UBZ9 1251 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 U3KQV3 271 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 C5orf49A4QMS7 147 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 DCTN6O00399 190 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 IGHV3-13P01766 116 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 FAM157BP0CG42 384 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 WNT5AP41221 380 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 MRPS11P82912 194 aaKnown RBP17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 SLC36A3Q495N2 470 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 ZNF362Q5T0B9 420 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 MBNL2Q5VZF2 373 aaKnown RBP17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 ZNF774Q6NX45 483 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 ZNF786Q8N393 782 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 GJC3Q8NFK1 279 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 SLC26A10Q8NG04 563 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR10G2Q8NGC3 310 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR4K13Q8NH42 304 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 GIPC3Q8TF64 312 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 DCLRE1CQ96SD1 692 aaKnown RBP17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 NKIRAS2Q9NYR9 191 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 CGGBP1Q9UFW8 167 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 KCNG2Q9UJ96 466 aa17.92■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR6C68A6NDL8 312 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR6C6A6NF89 314 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 SMAD7O15105 426 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 LCKP06239 509 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 ADRA2AP08913 450 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 ZNF718Q3SXZ3 478 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 VASH1Q7L8A9 365 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 SPATA24Q86W54 205 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 ZNF101Q8IZC7 436 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR2T33Q8NG76 320 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR52E2Q8NGJ4 325 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR1J1Q8NGS3 322 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 NRBF2Q96F24 287 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 MARS2Q96GW9 593 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 C4orf45Q96LM5 186 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 COG8Q96MW5 612 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 SYT3Q9BQG1 590 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 ASH2LQ9UBL3 628 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 DNAJB9Q9UBS3 223 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 DUSP13Q9UII6 198 aa17.91■□□□□ 0.46
TRAPPC9-215ENST00000524162 JMJD1CQ15652 2540 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 DOK2O60496 412 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 TP53P04637 393 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 LIPAP38571 399 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 ARHGDIAP52565 204 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 KRTAP1-1Q07627 177 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 PCGF3Q3KNV8 242 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 LRP11Q86VZ4 500 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR8D4Q8NGM9 314 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 OR2T4Q8NH00 348 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 TSSK2Q96PF2 358 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 FEVQ99581 238 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 PIMREGQ9BSJ6 248 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 PLA2G12AQ9BZM1 189 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 HDHD2Q9H0R4 259 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 RPRD1BQ9NQG5 326 aaKnown RBP17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 TBC1D23Q9NUY8 699 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 PLEK2Q9NYT0 353 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 KLHL21Q9UJP4 597 aa17.9■□□□□ 0.46
TRAPPC9-215ENST00000524162 GNGT2O14610 69 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 FKBP6O75344 327 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 MT-ND5P03915 603 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 DAOP14920 347 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 CCNOP22674 350 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 NR4A2P43354 598 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 CENPAP49450 140 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 RGS6P49758 472 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 PPP1R8Q12972 351 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 FAM209AQ5JX71 171 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 CLEC12AQ5QGZ9 265 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 UBASH3BQ8TF42 649 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 DNAJC9Q8WXX5 260 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 COQ7Q99807 217 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 RBM4Q9BWF3 364 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 TSSK6Q9BXA6 273 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 RERGLQ9H628 205 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 SRA1Q9HD15 236 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 MYEF2Q9P2K5 600 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 LHFPL6Q9Y693 200 aa17.89■□□□□ 0.45
TRAPPC9-215ENST00000524162 A0A1W2PPW3 197 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms