RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 RNF222A6NCQ9 220 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 SOX1O00570 391 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 HTR3BO95264 441 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 APODP05090 189 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 MOGAT2Q3SYC2 334 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 WBP2NLQ6ICG8 309 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 PRSS35Q8N3Z0 413 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 MARCH1Q8TCQ1 289 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 THRSPQ92748 146 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 C20orf24Q9BUV8 137 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 SEMA6CQ9H3T2 930 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 KLF15Q9UIH9 416 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 VSIG4Q9Y279 399 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 TRBV5-5A0A0J9YX44 114 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 CPED1A4D0V7 1026 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 CDC14CA4D256 554 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 LINC01387J3KSC0 135 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 HOXB5P09067 269 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLC35E2P0CK97 266 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 CPT2P23786 658 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 KIR3DL2P43630 455 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 NPY4RP50391 375 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 ADPRHP54922 357 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLC22A6Q4U2R8 563 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 FHL5Q5TD97 284 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 COX15Q7KZN9 410 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 LINC00346Q8IVM7 164 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 ADOQ96SZ5 270 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 GPER1Q99527 375 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 LYRM4Q9HD34 91 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 PRMT8Q9NR22 394 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 POLE3Q9NRF9 147 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 HHLA2Q9UM44 414 aa11.58□□□□□ -0.56
TRAPPC9-208ENST00000520857 PNMTP11086 282 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 MAOAP21397 527 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 C5AR1P21730 350 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR3A2P47893 321 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 NR0B1P51843 470 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 CEBPGP53567 150 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 BTG2P78543 158 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF74Q16587 644 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF776Q68DI1 518 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 FCRL6Q6DN72 434 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 CA13Q8N1Q1 262 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 PHYHIPLQ96FC7 376 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 SPACA5Q96QH8 159 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 UQCC1Q9NVA1 299 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 C5orf42Q9H799 3197 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 C9orf170A2RU37 121 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 SCGB1D2O95969 90 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 FABP1P07148 127 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 CD96P40200 585 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 NOGQ13253 232 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 FHL1Q13642 323 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLC17A1Q14916 467 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 MED25Q71SY5 747 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR5AP2Q8NGF4 316 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 NT5CQ8TCD5 201 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 SULT4A1Q9BR01 284 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 ELL3Q9HB65 397 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 RHOFQ9HBH0 211 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 SULT2B1O00204 365 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 PTGFRP43088 359 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 FBXW4P57775 412 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 CTAG1AP78358 180 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF616Q08AN1 781 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 TDGQ13569 410 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 MESTQ5EB52 335 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 VWA2Q5GFL6 755 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 LCN10Q6JVE6 187 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 NAA40Q86UY6 237 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 CDC20BQ86Y33 519 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 C16orf52Q8NHV5 167 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 FAM174AQ8TBP5 190 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 GLYATL2Q8WU03 294 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF285Q96NJ3 590 aa11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 ALX4Q9H161 411 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-208ENST00000520857 NOTCH4Q99466 2003 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 C2orf74A8MZ97 194 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 P2RY10O00398 339 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 PHYHO14832 338 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ADH1BP00325 375 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 FREM3P0C091 2139 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 RNH1P13489 461 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 MECP2P51608 486 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ELAVL1Q15717 326 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 DMRTC1Q5HYR2 192 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 EXOSC6Q5RKV6 272 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 HLA-DQA1Q5Y7H0 255 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 EIF5AL1Q6IS14 154 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 BCORP1Q8N888 145 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ADAD2Q8NCV1 583 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF248Q8NDW4 579 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 CD300LFQ8TDQ1 290 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ROBO4Q8WZ75 1007 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 MMABQ96EY8 250 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 TSPAN32Q96QS1 320 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF426Q9BUY5 554 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 MMP25Q9NPA2 562 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ACKR4Q9NPB9 350 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms