RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PEX14O75381 377 aa22.95■■□□□ 1.26
COL13A1-213ENST00000520267 HPXP02790 462 aa22.95■■□□□ 1.26
COL13A1-213ENST00000520267 KLK3P07288 261 aaPredicted RBP22.95■■□□□ 1.26
COL13A1-213ENST00000520267 SNRPD2P62316 118 aaKnown RBP22.95■■□□□ 1.26
COL13A1-213ENST00000520267 UEVLDQ8IX04 471 aa22.95■■□□□ 1.26
COL13A1-213ENST00000520267 OR4K17Q8NGC6 315 aa22.95■■□□□ 1.26
COL13A1-213ENST00000520267 OR13C3Q8NGS6 347 aa22.95■■□□□ 1.26
COL13A1-213ENST00000520267 RBP7Q96R05 134 aa22.95■■□□□ 1.26
COL13A1-213ENST00000520267 STMN3Q9NZ72 180 aa22.95■■□□□ 1.26
COL13A1-213ENST00000520267 PHF3Q92576 2039 aaKnown RBP22.95■■□□□ 1.26
COL13A1-213ENST00000520267 LOC107986453A0A1B0GWG9 222 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 GGT3PA6NGU5 568 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 LMX1BO60663 402 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 TPPPO94811 219 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 KDM4BO94953 1096 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 H2BFMP0C1H6 154 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 FSTP19883 344 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 ZFP36L1Q07352 338 aaKnown RBP22.94■■□□□ 1.26
COL13A1-213ENST00000520267 RNF133Q8WVZ7 376 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 SLC25A28Q96A46 364 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 CKLFQ9UBR5 152 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 LOC100289279A0A1B0GTE1 492 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 EIF1AXP47813 144 aaKnown RBP22.94■■□□□ 1.26
COL13A1-213ENST00000520267 CAMK2DQ13557 499 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 CLPPQ16740 277 aaPredicted RBP22.94■■□□□ 1.26
COL13A1-213ENST00000520267 TRIM61Q5EBN2 209 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 DEGS2Q6QHC5 323 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 GPAT4Q86UL3 456 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 OR51A2Q8NGJ7 313 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 IMMP1LQ96LU5 166 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 CDV3Q9UKY7 258 aaKnown RBP22.94■■□□□ 1.26
COL13A1-213ENST00000520267 CFAP54Q96N23 3096 aa22.94■■□□□ 1.26
COL13A1-213ENST00000520267 TMEM272A0A1B0GTI8 110 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 CIB4A0PJX0 185 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 KLF7O75840 302 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-213ENST00000520267 ALDOBP05062 364 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 ISG15P05161 165 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 ACHEP22303 614 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 SFTPDP35247 375 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 VEGFCP49767 419 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-213ENST00000520267 ADPRHL1Q8NDY3 354 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 OR10H5Q8NGA6 315 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 DEDD2Q8WXF8 326 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 HYLS1Q96M11 299 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 GON7Q9BXV9 100 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 MED12Q93074 2177 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 COX6A1P12074 109 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 KLK2P20151 261 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 GLT8D1Q68CQ7 371 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 SLAMF6Q96DU3 332 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 DIABLOQ9NR28 239 aa22.93■■□□□ 1.26
COL13A1-213ENST00000520267 CGGBP1Q9UFW8 167 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-213ENST00000520267 P2RY10O00398 339 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 TP53I11O14683 189 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 ARPC1BO15143 372 aaKnown RBP22.92■■□□□ 1.26
COL13A1-213ENST00000520267 RAMP1O60894 148 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 CER1O95813 267 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 ANXA3P12429 323 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 LAP3P28838 519 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 DNASE1L1P49184 302 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 DUSP3P51452 185 aaPredicted RBP22.92■■□□□ 1.26
COL13A1-213ENST00000520267 CLRN1P58418 232 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 ZXDAP98168 799 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 TRA2AQ13595 282 aaKnown RBP eCLIP22.92■■□□□ 1.26
COL13A1-213ENST00000520267 LINC00303Q3SY05 128 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 ZNF700Q9H0M5 742 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 PTGES2Q9H7Z7 377 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 ZFP64Q9NPA5 681 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 CYB5R1Q9UHQ9 305 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 HSPB11Q9Y547 144 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 TRAV18A0A075B6X5 111 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 A0A1W2PPL8 197 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 TRAF3IP2O43734 574 aaPredicted RBP22.92■■□□□ 1.26
COL13A1-213ENST00000520267 ZNF780AO75290 641 aaPredicted RBP22.92■■□□□ 1.26
COL13A1-213ENST00000520267 PGA4P0DJD7 388 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 PGA3P0DJD8 388 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 SULT1A3P0DMM9 295 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 SULT1A4P0DMN0 295 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 MC2RQ01718 297 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 GUCA2AQ02747 115 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 TMEM176BQ3YBM2 270 aaPredicted RBP22.92■■□□□ 1.26
COL13A1-213ENST00000520267 GLYATL3Q5SZD4 288 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 THEM4Q5T1C6 240 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 ZNF704Q6ZNC4 412 aaPredicted RBP22.92■■□□□ 1.26
COL13A1-213ENST00000520267 FGD2Q7Z6J4 655 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 NOXO1Q8NFA2 376 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 OR10S1Q8NGN2 331 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 LILRB4Q8NHJ6 448 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 HS3ST3B1Q9Y662 390 aa22.92■■□□□ 1.26
COL13A1-213ENST00000520267 MRPS18BQ9Y676 258 aaKnown RBP22.92■■□□□ 1.26
COL13A1-213ENST00000520267 H7C417 338 aa22.91■■□□□ 1.26
COL13A1-213ENST00000520267 SSNA1O43805 119 aa22.91■■□□□ 1.26
COL13A1-213ENST00000520267 RBBP9O75884 186 aa22.91■■□□□ 1.26
COL13A1-213ENST00000520267 S100A1P23297 94 aa22.91■■□□□ 1.26
COL13A1-213ENST00000520267 SPOCK1Q08629 439 aa22.91■■□□□ 1.26
COL13A1-213ENST00000520267 NOX3Q9HBY0 568 aa22.91■■□□□ 1.26
COL13A1-213ENST00000520267 FAM206AQ9NX38 181 aa22.91■■□□□ 1.26
COL13A1-213ENST00000520267 MTFP1Q9UDX5 166 aa22.91■■□□□ 1.26
COL13A1-213ENST00000520267 ING4Q9UNL4 249 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms