RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 LRR1Q96L50 414 aa5.27□□□□□ -1.57
CTNNA1-216ENST00000519489 ULBP2Q9BZM5 246 aa5.27□□□□□ -1.57
CTNNA1-216ENST00000519489 MIEF1Q9NQG6 463 aa5.27□□□□□ -1.57
CTNNA1-216ENST00000519489 TMEM38BQ9NVV0 291 aa5.27□□□□□ -1.57
CTNNA1-216ENST00000519489 MKS1Q9NXB0 559 aa5.27□□□□□ -1.57
CTNNA1-216ENST00000519489 CHMP2BQ9UQN3 213 aa5.27□□□□□ -1.57
CTNNA1-216ENST00000519489 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
CTNNA1-216ENST00000519489 CXorf65A6NEN9 183 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 MIF4GDA9UHW6 222 aaKnown RBP5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 IFNL4K9M1U5 179 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 PDPK1O15530 556 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 MFAP3LO75121 409 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 CRCPO75575 148 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 OR4F21O95013 312 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 KRT14P02533 472 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 GYPAP02724 150 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 AMY1AP04745 511 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 AMY2AP04746 511 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 SERPINE1P05121 402 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 LPLP06858 475 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 TFPTP0C1Z6 253 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 GFAPP14136 432 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 AHCYP23526 432 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 STOMP27105 288 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 PRKAR1BP31321 381 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 HTR3AP46098 478 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 ACSM2AQ08AH3 577 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 MPPED2Q15777 294 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 ZMAT1Q5H9K5 638 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 ACSM2BQ68CK6 577 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 NXNQ6DKJ4 435 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 OR5AS1Q8N127 324 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 PTGR2Q8N8N7 351 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 SLC26A10Q8NG04 563 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 OR5M8Q8NGP6 311 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 OR1J2Q8NGS2 313 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 ST8SIA4Q92187 359 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 SLC25A36Q96CQ1 311 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 CMBLQ96DG6 245 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 EAF1Q96JC9 268 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 OR7D2Q96RA2 312 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 GPR22Q99680 433 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 TRIM5Q9C035 493 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 ZCCHC3Q9NUD5 404 aaKnown RBP5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 GFOD1Q9NXC2 390 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 VNN3Q9NY84 501 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 IFNKQ9P0W0 207 aa5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 POLR3HQ9Y535 204 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-216ENST00000519489 TNCP24821 2201 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 ELOVL7A1L3X0 281 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 LGALS8O00214 317 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 SNRPAP09012 282 aaKnown RBP5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 SELLP14151 372 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 STMN1P16949 149 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 AMY2BP19961 511 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 APLNRP35414 380 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 ANXA11P50995 505 aaKnown RBP5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 RAD23AP54725 363 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 MGAT5Q09328 741 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 FUT5Q11128 374 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 MAB21L1Q13394 359 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 C1DQ13901 141 aaKnown RBP5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 KIR3DS1Q14943 382 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 TMEM53Q6P2H8 277 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 SASS6Q6UVJ0 657 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 FAM90A1Q86YD7 464 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 ARMC8Q8IUR7 673 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 ATG16L2Q8NAA4 619 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 AKR7LQ8NHP1 331 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 Q8TCH9 128 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 TMEM54Q969K7 222 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 TEX37Q96LM6 180 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 BPIFA3Q9BQP9 254 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 TAPBPLQ9BX59 468 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 ZNF350Q9GZX5 532 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 C1orf198Q9H425 327 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 EXOSC3Q9NQT5 275 aaKnown RBP5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 MAN2C1Q9NTJ4 1040 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 SELENONQ9NZV5 590 aa5.25□□□□□ -1.57
CTNNA1-216ENST00000519489 LOC102725191A0A1B0GVB3 256 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 IQCMA0A1B0GVH7 501 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 FAM90A8PA6NJQ4 464 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 A8MVM7 634 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 H3BSA7 217 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 SURF4O15260 269 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 SHOXO15266 292 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 ECDO95905 644 aaPredicted RBP5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 NCF2P19878 526 aaPredicted RBP5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 CBLP22681 906 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 RPS5P46782 204 aaKnown RBP5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 SLC12A2P55011 1212 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 KCNJ10P78508 379 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 C2orf54Q08AI8 447 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 FRG1Q14331 258 aaKnown RBP5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 FASTKD3Q14CZ7 662 aaKnown RBP5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 SPIN4Q56A73 249 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 PRAMEF6Q5VXH4 476 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 TYW3Q6IPR3 259 aaKnown RBP5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 SLC16A14Q7RTX9 510 aa5.24□□□□□ -1.57
CTNNA1-216ENST00000519489 ZNF695Q8IW36 515 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms