RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 ASB5Q8WWX0 329 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 B9D1Q9UPM9 204 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 DHDHQ9UQ10 334 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 CSAG2Q9Y5P2 127 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 KNL1Q8NG31 2342 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 EIF3GO75821 320 aaKnown RBP eCLIP11.13□□□□□ -0.63
PCM1-203ENST00000517545 APBB3O95704 486 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 PDZK1IP1Q13113 114 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 SLC17A1Q14916 467 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 C10orf91Q5T1B1 145 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ZNF584Q8IVC4 421 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 JAGN1Q8N5M9 183 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ELP5Q8TE02 316 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 RRNAD1Q96FB5 475 aaKnown RBP11.13□□□□□ -0.63
PCM1-203ENST00000517545 CRB3Q9BUF7 120 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 Q9N2J8 555 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 CARHSP1Q9Y2V2 147 aaKnown RBP11.13□□□□□ -0.63
PCM1-203ENST00000517545 C11orf98E9PRG8 122 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 K7EQS6 105 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 CD79AP11912 226 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 AKR1C4P17516 323 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ADAM8P78325 824 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 POMZP3Q6PJE2 187 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 TMEM184AQ6ZMB5 413 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 OR10R2Q8NGX6 335 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 MITD1Q8WV92 249 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ROBO4Q8WZ75 1007 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 DCUN1D4Q92564 292 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ARL11Q969Q4 196 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 CNTNAP3BQ96NU0 1288 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 OR8B4Q96RC9 309 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ZFP57Q9NU63 452 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 SZT2Q5T011 3432 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 MYO15AQ9UKN7 3530 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 LINC00587B1AMM8 73 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 FARS2O95363 451 aaKnown RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 ACAA1P09110 424 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 APEHP13798 732 aaKnown RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 C5AR1P21730 350 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 EIF2B1Q14232 305 aaKnown RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 RTN4RL2Q86UN3 420 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 OR4K17Q8NGC6 315 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 FOXRED1Q96CU9 486 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 KXD1Q9BQD3 176 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 PRMT8Q9NR22 394 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 FANCMQ8IYD8 2048 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 TBC1D3DA0A087WVF3 549 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 C5orf51A6NDU8 294 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 C17orf51A8MQB3 221 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 ZNF705EA8MWA4 302 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 TBC1D3LB9A6J9 549 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 LMX1BO60663 402 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 TXNDC12O95881 172 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 RENP00797 406 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 ERCC1P07992 297 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 SPARCP09486 303 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 TBC1D3HP0C7X1 549 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 CTNNB1P35222 781 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 RNASE10Q5GAN6 216 aaKnown RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 AVPI1Q5T686 147 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 C1QL3Q5VWW1 255 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 TBC1D3CQ6IPX1 549 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 TBC1D3Q8IZP1 549 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 BHLHE23Q8NDY6 225 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 C16orf52Q8NHV5 167 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 NANPQ8TBE9 248 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 SLC25A44Q96H78 314 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 ACKR4Q9NPB9 350 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 UQCC1Q9NVA1 299 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 DHCR7Q9UBM7 475 aaKnown RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 TMEM14AQ9Y6G1 99 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 SNAPINO95295 136 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 GJA4P35212 333 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 SEC13P55735 322 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 RAB38P57729 211 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 S100A12P80511 92 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 SWI5Q1ZZU3 235 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 ADGRE4PQ86SQ3 457 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 FJX1Q86VR8 437 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 BAP18Q8IXM2 172 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 TAAR8Q969N4 342 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 SCARF2Q96GP6 870 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 PHB2Q99623 299 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 G6PC3Q9BUM1 346 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 FN3KRPQ9HA64 309 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 CHMP1AQ9HD42 196 aaPredicted RBP11.12□□□□□ -0.63
PCM1-203ENST00000517545 TMEM100Q9NV29 134 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
PCM1-203ENST00000517545 F8VVB4 439 aa11.11□□□□□ -0.63
PCM1-203ENST00000517545 F8VWA3 439 aa11.11□□□□□ -0.63
PCM1-203ENST00000517545 IL2RAP01589 272 aa11.11□□□□□ -0.63
PCM1-203ENST00000517545 HNRNPA1P09651 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
PCM1-203ENST00000517545 HLA-GP17693 338 aa11.11□□□□□ -0.63
PCM1-203ENST00000517545 PPICP45877 212 aa11.11□□□□□ -0.63
PCM1-203ENST00000517545 BTG2P78543 158 aa11.11□□□□□ -0.63
PCM1-203ENST00000517545 AIMP2Q13155 320 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms