RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 GSK3BP49841 420 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 AP2S1P53680 142 aaPredicted RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 HCCSP53701 268 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CLDN12P56749 244 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR10A3P58181 314 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ERVS71-1P61550 626 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ARF6P62330 175 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SLC25A11Q02978 314 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TGFBR3Q03167 851 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 C2orf54Q08AI8 447 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SLC10A7Q0GE19 358 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TWF1Q12792 350 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ELAVL2Q12926 359 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 MLLT11Q13015 90 aaPredicted RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 PDIA2Q13087 525 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 KIR2DS1Q14954 304 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 GUSBP1Q15486 140 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 NSUN5P1Q3KNT7 163 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ACSM3Q53FZ2 586 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 MUC21Q5SSG8 566 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TPTE2P1Q5T6R2 138 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 FAM27D1Q5T7N8 215 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 RWDD4Q6NW29 188 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 LCLAT1Q6UWP7 414 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 DRAM2Q6UX65 266 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 WDR82Q6UXN9 313 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 RBMS3Q6XE24 437 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 Q6ZN92 141 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 RTL4Q6ZR62 310 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 Q6ZT83 130 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ACOT7LQ6ZUV0 252 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TMEM150AQ86TG1 271 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 MRPL52Q86TS9 123 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 PIM3Q86V86 326 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 HORMAD1Q86X24 394 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TRAPPC5Q8IUR0 188 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ITPRIPQ8IWB1 547 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 WDFY1Q8IWB7 410 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 NRMQ8IXM6 262 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CA13Q8N1Q1 262 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ATPAF2Q8N5M1 289 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 METTL27Q8N6F8 245 aaPredicted RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CCNYL1Q8N7R7 359 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF491Q8N8L2 437 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CCDC71LQ8N9Z2 235 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR5AP2Q8NGF4 316 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR5B17Q8NGF7 314 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR13A1Q8NGR1 328 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR2AE1Q8NHA4 323 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 DNASE2BQ8WZ79 361 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 DDB2Q92466 427 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 RASL10AQ92737 203 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ARPC1AQ92747 370 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 RCN3Q96D15 328 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SLC25A38Q96DW6 304 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 YIPF6Q96EC8 236 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CNRIP1Q96F85 164 aaPredicted RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF681Q96N22 645 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 COL21A1Q96P44 957 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TSNAXQ99598 290 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 NUDT9Q9BW91 350 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TM2D1Q9BX74 207 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 BCL2L14Q9BZR8 327 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ARL6Q9H0F7 186 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 METTL9Q9H1A3 318 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 EBF2Q9HAK2 575 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 PLGRKTQ9HBL7 147 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 NDE1Q9NXR1 346 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 PRODH2Q9UF12 536 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 MLXQ9UH92 298 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 BTNL2Q9UIR0 455 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 MSH6P52701 1360 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 A0A087X1B8 175 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 A0A0B4J2E0 115 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 TEX48A0A1B0GUV7 120 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 A0A1B0GX12 115 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 ISPDA4D126 451 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR2AT4A6NND4 320 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 B4DXG7 233 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 F5H5T6 163 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 F5H768 121 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 H3BNH8 94 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 ACOT8O14734 319 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 PHF1O43189 567 aaPredicted RBP3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 ERI3O43414 337 aaKnown RBP3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 GATCO43716 136 aaKnown RBP3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 BMP15O95972 392 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 LALBAP00709 142 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 IGHV3-9P01782 118 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 HOXC4P09017 264 aaPredicted RBP3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR8U9P0C7N5 309 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 LIMS3P0CW19 117 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 LIMS4P0CW20 117 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 GABRG2P18507 467 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 GNRHRP30968 328 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 SHMT2P34897 504 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 ARL2P36404 184 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 DCTP40126 519 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 CSRP3P50461 194 aa3.24□□□□□ -1.89
RNU4-60P-201ENST00000517239 CAV2P51636 162 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms