RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 JAM3Q9BX67 310 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 TRIM2Q9C040 744 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 RGCCQ9H4X1 137 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 PIAS3Q9Y6X2 628 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 CPED1A4D0V7 1026 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 CTSEP14091 401 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 ST6GAL1P15907 406 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 PPP1R1AQ13522 171 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 PRICKLE4Q2TBC4 344 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 ZNF542PQ5EBM4 170 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 NCMAPQ5T1S8 102 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 ZNF600Q6ZNG1 722 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 TMEM52Q8NDY8 209 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
VCAN-210ENST00000513960 UQCC1Q9NVA1 299 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 KLHDC2Q9Y2U9 406 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 ARHGEF17Q96PE2 2063 aaPredicted RBP8.72□□□□□ -1.01
VCAN-210ENST00000513960 TCRBV21S2A2A0A5A6 115 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 EPOPA6NHQ4 379 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 RDH16O75452 317 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 PRH1P02810 166 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 SFTA3P0C7M3 94 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 DRD1P21728 446 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 SERPINF1P36955 418 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 EIF1AXP47813 144 aaKnown RBP8.72□□□□□ -1.01
VCAN-210ENST00000513960 ATPAF1Q5TC12 328 aaPredicted RBP8.72□□□□□ -1.01
VCAN-210ENST00000513960 FHL5Q5TD97 284 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 TMEM184AQ6ZMB5 413 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 SLC29A4Q7RTT9 530 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 BAP18Q8IXM2 172 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 OR4N2Q8NGD1 307 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 OR52R1Q8NGF1 315 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 OR5M8Q8NGP6 311 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 TCTEX1D2Q8WW35 142 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 RBM18Q96H35 190 aaKnown RBP8.72□□□□□ -1.01
VCAN-210ENST00000513960 AKR1E2Q96JD6 320 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 BCL2L14Q9BZR8 327 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 RHOFQ9HBH0 211 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 FLRT3Q9NZU0 649 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 KCNE5Q9UJ90 142 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 TNFSF18Q9UNG2 199 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 CYR61O00622 381 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 BRINP1O60477 761 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 NME1P15531 152 aaKnown RBP8.71□□□□□ -1.01
VCAN-210ENST00000513960 ADCYAP1P18509 176 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 RAB2AP61019 212 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 MRPS21P82921 87 aaKnown RBP8.71□□□□□ -1.01
VCAN-210ENST00000513960 IL10RAQ13651 578 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 PDZD11Q5EBL8 140 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 NKAIN2Q5VXU1 208 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 CA13Q8N1Q1 262 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 EIF4E3Q8N5X7 224 aaKnown RBP8.71□□□□□ -1.01
VCAN-210ENST00000513960 OR13H1Q8NG92 308 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 NUDCD2Q8WVJ2 157 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 RSC1A1Q92681 617 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 PMM1Q92871 262 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 CMBLQ96DG6 245 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 ARL5BQ96KC2 179 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 CLCC1Q96S66 551 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 ZNF251Q9BRH9 671 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 ELOVL3Q9HB03 270 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 SMCO4Q9NRQ5 59 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 XKRYO14609 159 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 SEMA4FO95754 770 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 CT62P0C5K7 136 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 RPS4Y1P22090 263 aaKnown RBP8.71□□□□□ -1.01
VCAN-210ENST00000513960 PTAFRP25105 342 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 HAAOP46952 286 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 DEFB110Q30KQ9 67 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 KIRREL2Q6UWL6 708 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 SHISA5Q8N114 240 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 ACKR4Q9NPB9 350 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 CENPMQ9NSP4 180 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 FRRS1LQ9P0K9 344 aa8.71□□□□□ -1.01
VCAN-210ENST00000513960 KIR2DS5A0A0G2JLQ3 304 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 A0A0G2JNG1 304 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 hCG_1809904A0A1W2PP81 198 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 A0A1W2PR64 198 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 A0A1W2PRV1 198 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 FAM221BA6H8Z2 402 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 A6NLC8 198 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 KIR2DS3K7RE56 304 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 ADAM11O75078 769 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 WNT11O96014 354 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 NGFRP08138 427 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 SLC2A5P22732 501 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 CALCRP30988 508 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 RABIFP47224 123 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 TFF2Q03403 129 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 KIR2DS5Q14953 304 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 INPP5JQ15735 1006 aaPredicted RBP8.71□□□□□ -1.02
VCAN-210ENST00000513960 ALG10Q5BKT4 473 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 LCN10Q6JVE6 187 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 UQCC3Q6UW78 93 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 PGAP1Q75T13 922 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 TRAPPC6BQ86SZ2 158 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 OR9A4Q8NGU2 314 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 SLC37A2Q8TED4 501 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 SLC41A2Q96JW4 573 aa8.71□□□□□ -1.02
VCAN-210ENST00000513960 MRI1Q9BV20 369 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms