RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TEX12Q9BXU0 123 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 TTTY10Q9BZA0 68 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 OR2H1Q9GZK4 316 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 WNT5BQ9H1J7 359 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 ESRP2Q9H6T0 727 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 UBTD1Q9HAC8 227 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 RASSF1Q9NS23 344 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 SMPD3Q9NY59 655 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CRNNQ9UBG3 495 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 MOKQ9UQ07 419 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 RNF115Q9Y4L5 304 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 GMPPBQ9Y5P6 360 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 C12orf71A8MTZ7 269 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 SHISA9B4DS77 424 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 E9PQ18 207 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 SMAD7O15105 426 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 RER1O15258 196 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 GLCEO94923 617 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF14P17017 642 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 CCNOP22674 350 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 GSTT1P30711 240 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 ARR3P36575 388 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 AQP4P55087 323 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 CDH11P55287 796 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 NAAAQ02083 359 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 NRN1LQ496H8 165 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC18B1Q6NT16 456 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 VHLLQ6RSH7 139 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC22A25Q6T423 547 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 TMEM108Q6UXF1 575 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 SPATC1Q76KD6 591 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 SHFQ7M4L6 423 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 CDC20BQ86Y33 519 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 OR6N2Q8NGY6 317 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 AKAP1Q92667 903 aaKnown RBP eCLIP8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 C14orf79Q96F83 325 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 HRASLS5Q96KN8 279 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 PITX2Q99697 317 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 PRRG3Q9BZD7 231 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 KCNN2Q9H2S1 579 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 LIME1Q9H400 295 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 NGBQ9NPG2 151 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 FAM118AQ9NWS6 357 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 IMPAD1Q9NX62 359 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 POU2F3Q9UKI9 436 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 KLHDC2Q9Y2U9 406 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 ATP23Q9Y6H3 246 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 APCP25054 2843 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 SETXQ7Z333 2677 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 ABCA12Q86UK0 2595 aa8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 FLNBO75369 2602 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-209ENST00000513818 CADP27708 2225 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 RAI1Q7Z5J4 1906 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 IGHV2OR16-5A0A0B4J2B6 119 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 LOC100130705A0A1B0GUX0 176 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 FAM221AA4D161 298 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 DBHP09172 617 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 FAM157BP0CG42 384 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF823P16415 610 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 PTAFRP25105 342 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 SSTR2P30874 369 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 FMO3P31513 532 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 HTR5AP47898 357 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 ENTPD1P49961 510 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 NR1H2P55055 460 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 CDC42P60953 191 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 EFNB1P98172 346 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 SCRN3Q0VDG4 424 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 AQP6Q13520 282 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 KCNMB1Q16558 191 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 CCDC92Q53HC0 331 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 AADACL4Q5VUY2 407 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 KRT80Q6KB66 452 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 CCDC36Q8IYA8 594 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 ENTHD1Q8IYW4 607 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 RFLNBQ8N5W9 214 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 PACRGLQ8N7B6 248 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC30A7Q8NEW0 376 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 LILRB1Q8NHL6 650 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 MAP6Q96JE9 813 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 INTS14Q96SY0 518 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 AMELYQ99218 206 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 KCNS3Q9BQ31 491 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 TMEM204Q9BSN7 226 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 PLEK2Q9NYT0 353 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 KCNG2Q9UJ96 466 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 GDF2Q9UK05 429 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 NDRG4Q9ULP0 352 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 ABCA4P78363 2273 aa8.49□□□□□ -1.05
TOPBP1-209ENST00000513818 CACNA1DQ01668 2161 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 LOC100509620A0A075B734 347 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 IQCMA0A1B0GVH7 501 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 C5orf49A4QMS7 147 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 E7EQL1 145 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF593O00488 134 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 PRODHO43272 600 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 SGCEO43556 437 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 GPRIN2O60269 458 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 ENTPD6O75354 484 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms