RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 MRPS30Q9NP92 439 aaKnown RBP3.68□□□□□ -1.82
LINC01088-209ENST00000512130 TMEM9BQ9NQ34 198 aa3.68□□□□□ -1.82
LINC01088-209ENST00000512130 DDX18Q9NVP1 670 aaKnown RBP3.68□□□□□ -1.82
LINC01088-209ENST00000512130 RBAKQ9NYW8 714 aaPredicted RBP3.68□□□□□ -1.82
LINC01088-209ENST00000512130 PSME2Q9UL46 239 aa3.68□□□□□ -1.82
LINC01088-209ENST00000512130 ARHGAP21Q5T5U3 1957 aa3.68□□□□□ -1.82
LINC01088-209ENST00000512130 TTC41PQ6P2S7 1318 aa3.68□□□□□ -1.82
LINC01088-209ENST00000512130 IGLV4-69A0A075B6H9 119 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 IGLV3-16A0A075B6K0 115 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 KCNE1BA0A087WTH5 132 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 A0A096LNJ9 63 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 TEX46H3BTG2 121 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 RAD51CO43502 376 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 LSM8O95777 96 aaKnown RBP3.67□□□□□ -1.82
LINC01088-209ENST00000512130 STAG3L3P0CL85 134 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 GGT1P19440 569 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 CCT6AP40227 531 aaKnown RBP3.67□□□□□ -1.82
LINC01088-209ENST00000512130 TNFSF9P41273 254 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 CSNK1A1P48729 337 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 CAPRIN1Q14444 709 aaKnown RBP3.67□□□□□ -1.82
LINC01088-209ENST00000512130 WDR43Q15061 677 aaKnown RBP eCLIP3.67□□□□□ -1.82
LINC01088-209ENST00000512130 UBE2SQ16763 222 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 STUMQ69YW2 141 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 FAM184AQ8NB25 1140 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 ZNF596Q8TC21 504 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 TM4SF18Q96CE8 201 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 JSRP1Q96MG2 331 aaPredicted RBP3.67□□□□□ -1.82
LINC01088-209ENST00000512130 UCK2Q9BZX2 261 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 NEUROG2Q9H2A3 272 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 SLC40A1Q9NP59 571 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 LHX9Q9NQ69 397 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 PDP1Q9P0J1 537 aaPredicted RBP3.67□□□□□ -1.82
LINC01088-209ENST00000512130 CTSFQ9UBX1 484 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 RAB26Q9ULW5 256 aa3.67□□□□□ -1.82
LINC01088-209ENST00000512130 MTCL1Q9Y4B5 1905 aaKnown RBP3.67□□□□□ -1.82
LINC01088-209ENST00000512130 TRAV25A0A0B4J276 109 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 A0A1B0GW55 424 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 DUX4L2P0CJ85 424 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 DUX4L3P0CJ86 424 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 DUX4L5P0CJ88 424 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 DUX4L6P0CJ89 424 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 DUX4L7P0CJ90 424 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 ZNF726P1Q15940 193 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 OR52W1Q6IF63 320 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 DUX4L9Q6RFH8 374 aaPredicted RBP3.66□□□□□ -1.82
LINC01088-209ENST00000512130 ARL9Q6T311 187 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 FAM92BQ6ZTR7 304 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 MRPL55Q7Z7F7 128 aaKnown RBP3.66□□□□□ -1.82
LINC01088-209ENST00000512130 NOXO1Q8NFA2 376 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 APH1BQ8WW43 257 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 GALNT14Q96FL9 552 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 LINC00167Q96N53 147 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 PLA2G2FQ9BZM2 168 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 CHRAC1Q9NRG0 131 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 DUX4Q9UBX2 424 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 PSG8Q9UQ74 426 aa3.66□□□□□ -1.82
LINC01088-209ENST00000512130 COL16A1Q07092 1604 aaPredicted RBP3.66□□□□□ -1.82
LINC01088-209ENST00000512130 PRRC2AP48634 2157 aaKnown RBP3.65□□□□□ -1.82
LINC01088-209ENST00000512130 IGHV5-51A0A0C4DH38 117 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 AIREO43918 545 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 RDH16O75452 317 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 HLA-HP01893 362 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 OR1E1P30953 314 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 RND2P52198 227 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 UBE2NP61088 152 aaKnown RBP3.65□□□□□ -1.83
LINC01088-209ENST00000512130 RAP1AP62834 184 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 ILKQ13418 452 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 TPTE2P1Q5T6R2 138 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 GPR107Q5VW38 600 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 PLCXD3Q63HM9 321 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 C12orf56Q8IXR9 622 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 CBR4Q8N4T8 237 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 CHST4Q8NCG5 386 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 PEX13Q92968 403 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 FOPNLQ96NB1 174 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 SLC7A5P2Q9GIP4 190 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 PIGUQ9H490 435 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 BEX1Q9HBH7 125 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 MRM3Q9HC36 420 aaKnown RBP3.65□□□□□ -1.83
LINC01088-209ENST00000512130 AGPAT4Q9NRZ5 378 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 KLK12Q9UKR0 248 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 TBX21Q9UL17 535 aa3.65□□□□□ -1.83
LINC01088-209ENST00000512130 MN1Q10571 1320 aaPredicted RBP3.65□□□□□ -1.83
LINC01088-209ENST00000512130 OR6C74A6NCV1 312 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 HBE1P02100 147 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 CLTAP09496 248 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 POLR2MP0CAP2 368 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 UBCP0CG48 685 aaKnown RBP3.64□□□□□ -1.83
LINC01088-209ENST00000512130 U2AF2P26368 475 aaKnown RBP eCLIP3.64□□□□□ -1.83
LINC01088-209ENST00000512130 SLC1A2P43004 574 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 RPS5P46782 204 aaKnown RBP3.64□□□□□ -1.83
LINC01088-209ENST00000512130 ZNF138P52744 262 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 LRRC63Q05C16 580 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 RAD51Q06609 339 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 ITIH4Q14624 930 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 NCF4Q15080 339 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 RGNQ15493 299 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 METTL21CQ5VZV1 264 aa3.64□□□□□ -1.83
LINC01088-209ENST00000512130 TTC19Q6DKK2 380 aaPredicted RBP3.64□□□□□ -1.83
LINC01088-209ENST00000512130 NCCRP1Q6ZVX7 275 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms