RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 COX4I1P13073 169 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 TUBG1P23258 451 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 IER3P46695 156 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 GDI2P50395 445 aaKnown RBP9.63□□□□□ -0.87
RNF4-216ENST00000511859 MVDP53602 400 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 DSTNP60981 165 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 PPP1CBP62140 327 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 HIST3H3Q16695 136 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 NLRC3Q7RTR2 1065 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 C10orf53Q8N6V4 93 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 OR2Z1Q8NG97 314 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 ABHD4Q8TB40 342 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 LRTOMTQ8WZ04 291 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 GTF2H4Q92759 462 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 MCHR2Q969V1 340 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 TMEM19Q96HH6 336 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 TRIM15Q9C019 465 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 DPAGT1Q9H3H5 408 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 RMND5AQ9H871 391 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 SIAEQ9HAT2 523 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 BCL2L10Q9HD36 194 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 CCNB1IP1Q9NPC3 277 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 TUBG2Q9NRH3 451 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 LOC100509620A0A075B734 347 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 IGHG1P01857 330 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 LIPFP07098 398 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 ETFAP13804 333 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 HTR2AP28223 471 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 ARHGDIAP52565 204 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 PSG7Q13046 419 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 HNRNPA0Q13151 305 aaKnown RBP9.63□□□□□ -0.87
RNF4-216ENST00000511859 CYLC2Q14093 348 aaPredicted RBP9.63□□□□□ -0.87
RNF4-216ENST00000511859 MAPRE2Q15555 327 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 RPS26P11Q5JNZ5 115 aaPredicted RBP9.63□□□□□ -0.87
RNF4-216ENST00000511859 ARL9Q6T311 187 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 Q6ZTK2 550 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 VASH1Q7L8A9 365 aaPredicted RBP9.63□□□□□ -0.87
RNF4-216ENST00000511859 ALDH16A1Q8IZ83 802 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 OR8B3Q8NGG8 313 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 SGCDQ92629 289 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 RCN3Q96D15 328 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 OR8B2Q96RD0 313 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 PCGF1Q9BSM1 259 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 TMEM43Q9BTV4 400 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 PAIP1Q9H074 479 aaKnown RBP9.63□□□□□ -0.87
RNF4-216ENST00000511859 TMEM27Q9HBJ8 222 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 GCM1Q9NP62 436 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 ARL8BQ9NVJ2 186 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 TAS2R5Q9NYW4 299 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 CLN8Q9UBY8 286 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 NDUFAF1Q9Y375 327 aa9.63□□□□□ -0.87
RNF4-216ENST00000511859 CENPVL3A0A0U1RRI6 287 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 ZNF816-ZNF321PA0A0X1KG74 233 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 CENPBD1B2RD01 187 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 MRASO14807 208 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 ENSAO43768 121 aaKnown RBP9.62□□□□□ -0.87
RNF4-216ENST00000511859 XPNPEP2O43895 674 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 IGHV4-59P01825 116 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 ZNF32P17041 273 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 PRKAR1BP31321 381 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 CLRN1P58418 232 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 NFYCQ13952 458 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 MSANTD1Q6ZTZ1 278 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 DHDDSQ86SQ9 333 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 LDLRAD3Q86YD5 345 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 GALNT4Q8N4A0 578 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 ITLN1Q8WWA0 313 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 C4orf45Q96LM5 186 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 TMEM246Q9BRR3 403 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 TPT1P8Q9HAU6 139 aa9.62□□□□□ -0.87
RNF4-216ENST00000511859 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
RNF4-216ENST00000511859 A0A0B4J2E0 115 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 A0A1B0GX12 115 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 LRRN3E7EW58 273 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 PHYHO14832 338 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 SLC22A2O15244 555 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 RNF13O43567 381 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 ZCCHC18P0CG32 403 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 THRBP10828 461 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 ETS2P15036 469 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 GSTM3P21266 225 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 KITLGP21583 273 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 TGFBR2P37173 567 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 PITPNBP48739 271 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 NCALDP61601 193 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 MRPS34P82930 218 aaKnown RBP9.61□□□□□ -0.87
RNF4-216ENST00000511859 PSG4Q00888 419 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 EGR3Q06889 387 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 HERPUD1Q15011 391 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 OR1Q1Q15612 314 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 SWT1Q5T5J6 900 aaKnown RBP9.61□□□□□ -0.87
RNF4-216ENST00000511859 WDR25Q64LD2 544 aaPredicted RBP9.61□□□□□ -0.87
RNF4-216ENST00000511859 DHRS7BQ6IAN0 325 aaPredicted RBP9.61□□□□□ -0.87
RNF4-216ENST00000511859 RFPL4BQ6ZWI9 263 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 MSRB3Q8IXL7 192 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 RP9Q8TA86 221 aaKnown RBP9.61□□□□□ -0.87
RNF4-216ENST00000511859 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 OR2V2Q96R30 315 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 ZNF607Q96SK3 696 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms