RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 HDDC2Q7Z4H3 204 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 CMC1Q7Z7K0 106 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 CBLN2Q8IUK8 224 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 KATNAL2Q8IYT4 538 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 FAM86B1Q8N7N1 296 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 C15orf56Q8N910 161 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 OR10AD1Q8NGE0 317 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 OR56A4Q8NGH8 313 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 OR2A1Q8NGT9 310 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 EEF1AKMT3Q96AZ1 226 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 CREB3L1Q96BA8 519 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 NAP1L5Q96NT1 182 aaPredicted RBP1.95□□□□□ -2.1
CHD1-207ENST00000511628 MTG1Q9BT17 334 aaPredicted RBP1.95□□□□□ -2.1
CHD1-207ENST00000511628 UCK2Q9BZX2 261 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 ACTR3CQ9C0K3 210 aaPredicted RBP1.95□□□□□ -2.1
CHD1-207ENST00000511628 AUNIPQ9H7T9 357 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 NOX3Q9HBY0 568 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 LYRM4Q9HD34 91 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 CCNB1IP1Q9NPC3 277 aa1.95□□□□□ -2.1
CHD1-207ENST00000511628 C20orf96Q9NUD7 363 aaPredicted RBP1.95□□□□□ -2.1
CHD1-207ENST00000511628 CCDC59Q9P031 241 aaKnown RBP1.95□□□□□ -2.1
CHD1-207ENST00000511628 UBN2Q6ZU65 1347 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 MAPK8IP3Q9UPT6 1336 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 IGKV2D-24A0A075B6R9 120 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 TRAV25A0A0B4J276 109 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 KBTBD11-OT1A0A1B0GTJ5 212 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 SUPT3HB4E1H0 165 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 INS-IGF2F8WCM5 200 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 SLC9A3R1O14745 358 aaPredicted RBP1.94□□□□□ -2.1
CHD1-207ENST00000511628 AKR7A2O43488 359 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 ANGPTL7O43827 346 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 FLOT1O75955 427 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 RAB3DO95716 219 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 EIF4EP06730 217 aaKnown RBP1.94□□□□□ -2.1
CHD1-207ENST00000511628 SLC1A2P43004 574 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 MRPL19P49406 292 aaKnown RBP1.94□□□□□ -2.1
CHD1-207ENST00000511628 CYB561P49447 251 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 PPOXP50336 477 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 STXBP1P61764 594 aaKnown RBP1.94□□□□□ -2.1
CHD1-207ENST00000511628 IL18Q14116 193 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 TRAM2Q15035 370 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 PON2Q15165 354 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 SF3A2Q15428 464 aaKnown RBP1.94□□□□□ -2.1
CHD1-207ENST00000511628 RGNQ15493 299 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 GPR107Q5VW38 600 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 TWF2Q6IBS0 349 aaKnown RBP1.94□□□□□ -2.1
CHD1-207ENST00000511628 C12orf54Q6X4T0 127 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 FAM92BQ6ZTR7 304 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 ABHD13Q7L211 337 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 PCP2Q8IVA1 136 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 OR9G4Q8NGQ1 327 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 OR5K2Q8NHB8 316 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 LKAAEAR1Q8TD35 194 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 PEX13Q92968 403 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 BMFQ96LC9 184 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 XPO6Q96QU8 1125 aaKnown RBP1.94□□□□□ -2.1
CHD1-207ENST00000511628 ELOVL6Q9H5J4 265 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 CLN8Q9UBY8 286 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 TBX21Q9UL17 535 aa1.94□□□□□ -2.1
CHD1-207ENST00000511628 ASTN1O14525 1302 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 GAKO14976 1311 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 IGKV2-28A0A075B6P5 120 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 IGHV3-74A0A0B4J1X5 117 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 IGHV5-51A0A0C4DH38 117 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 IGHV3-66A0A0C4DH42 116 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 GOLGA8TH3BQL2 631 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 L7N2F9 121 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CASQ2O14958 399 aaPredicted RBP1.93□□□□□ -2.1
CHD1-207ENST00000511628 SNAI2O43623 268 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CCNB2O95067 398 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 GABARAPO95166 117 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 IGKV2D-28P01615 120 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 ARG1P05089 322 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CT45A6P0DMU7 189 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CT45A5P0DMU8 189 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CT45A7P0DMV0 189 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 GGT1P19440 569 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CSNK2A2P19784 350 aaPredicted RBP1.93□□□□□ -2.1
CHD1-207ENST00000511628 MAGP20916 626 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CEACAM3P40198 252 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 RPS9P46781 194 aaKnown RBP1.93□□□□□ -2.1
CHD1-207ENST00000511628 EBI3Q14213 229 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 PRPSAP1Q14558 356 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 DEFB116Q30KQ4 102 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CT45A1Q5HYN5 189 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 ARL9Q6T311 187 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 TMEM205Q6UW68 189 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 SSX9Q7RTT3 188 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 TMEM150AQ86TG1 271 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 ARRDC1Q8N5I2 433 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 BBOF1Q8ND07 529 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 OR10G4Q8NGN3 311 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CT45A3Q8NHU0 189 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 ZNF707Q96C28 371 aaPredicted RBP1.93□□□□□ -2.1
CHD1-207ENST00000511628 ZNF681Q96N22 645 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 ZNF317Q96PQ6 595 aaPredicted RBP1.93□□□□□ -2.1
CHD1-207ENST00000511628 OR2A5Q96R48 311 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 MICU1Q9BPX6 476 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 ANP32EQ9BTT0 268 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 TMEM38AQ9H6F2 299 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms