RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SMARCD3Q6STE5 483 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 PTCHD4Q6ZW05 846 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 DHRS1Q96LJ7 313 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 TSSK2Q96PF2 358 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 ERMAPQ96PL5 475 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 FUZQ9BT04 418 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 NUAK2Q9H093 628 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 LPAR2Q9HBW0 351 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 TREM2Q9NZC2 230 aa12.64□□□□□ -0.39
UBE2D3-228ENST00000508974 ATRQ13535 2644 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 SPRY3O43610 288 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 KHDRBS3O75525 346 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 IGHV3-13P01766 116 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 MT-ND5P03915 603 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 CDKN2AP42771 156 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 ZNF81P51508 661 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 RPS6KA3P51812 740 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 SMIM11AP58511 58 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 MVKQ03426 396 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 MEP1BQ16820 701 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 CR1LQ2VPA4 569 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 GPR139Q6DWJ6 353 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 C1orf94Q6P1W5 598 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 ZNF771Q7L3S4 317 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 ZER1Q7Z7L7 766 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 ZDHHC21Q8IVQ6 265 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 FITM2Q8N6M3 262 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 CLDND2Q8NHS1 167 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 KLF14Q8TD94 323 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 SLC7A6Q92536 515 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 MARS2Q96GW9 593 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 C4orf45Q96LM5 186 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 GPX7Q96SL4 187 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 POFUT1Q9H488 388 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 DECR2Q9NUI1 292 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 TMEM160Q9NX00 188 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 ASH2LQ9UBL3 628 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 LPAR3Q9UBY5 353 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 CACNG2Q9Y698 323 aa12.63□□□□□ -0.39
UBE2D3-228ENST00000508974 PLSCR5A0PG75 271 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 B2RBV5 119 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 SGCEO43556 437 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 RP2O75695 350 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 ABHD16AO95870 558 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 SRD5A1P18405 259 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 ATP6V1B2P21281 511 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 SRSF2Q01130 221 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 SCRN3Q0VDG4 424 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 HNRNPA0Q13151 305 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 LEG1Q6P5S2 330 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 DPY19L2P2Q6ZN68 376 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 USP51Q70EK9 711 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 CXXC5Q7LFL8 322 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 JAZF1Q86VZ6 243 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 GLB1L2Q8IW92 636 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 LINC01356Q8N9X3 169 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 HPS1Q92902 700 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 SAMD8Q96LT4 415 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 CCT8L2Q96SF2 557 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 IFT27Q9BW83 186 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 OR52D1Q9H346 318 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 FN3KQ9H479 309 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 SAP30LQ9HAJ7 183 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 NDE1Q9NXR1 346 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 PLEK2Q9NYT0 353 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 VSX1Q9NZR4 365 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 NDRG4Q9ULP0 352 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 TMCC3Q9ULS5 477 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 POLR1DQ9Y2S0 133 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 GRIP1Q9Y3R0 1128 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 DNHD1Q96M86 4753 aa12.62□□□□□ -0.39
UBE2D3-228ENST00000508974 TANC2Q9HCD6 1990 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 IGHV1-69-2A0A0G2JMI3 117 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 ZSCAN5BA6NJL1 495 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 RNF212BA8MTL3 300 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 DCTN6O00399 190 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 AHCYL1O43865 530 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 IGHV1-46P01743 117 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 HNF1AP20823 631 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 SLC6A6P31641 620 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 MMP15P51511 669 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 ARHGDIAP52565 204 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 CDH15P55291 814 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 AQP6Q13520 282 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 MOGQ16653 247 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 PCGF3Q3KNV8 242 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 UNQ6126/PRO20091Q6UXV3 157 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 RINLQ6ZS11 566 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 VASH1Q7L8A9 365 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 SYT9Q86SS6 491 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 ADCK1Q86TW2 530 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 OR4K13Q8NH42 304 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 NMNAT3Q96T66 252 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 ELOVL3Q9HB03 270 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 MSL2Q9HCI7 577 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 SRA1Q9HD15 236 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 COL6A5A8TX70 2615 aa12.61□□□□□ -0.39
UBE2D3-228ENST00000508974 FAM157AC9JC47 383 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 RER1O15258 196 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 PHF1O43189 567 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms