RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TCN1P20061 433 aaPredicted RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 CDKN1AP38936 164 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 GSK3BP49841 420 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 NUDT2P50583 147 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 FABP6P51161 128 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 BIDP55957 195 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 TAS2R41P59536 307 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 PRPS1P60891 318 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 PSME3P61289 254 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 RPS16P62249 146 aaKnown RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 TGFBR3Q03167 851 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 PGGHGQ32M88 737 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 ZNF672Q499Z4 452 aaPredicted RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 COQ5Q5HYK3 327 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 FAM69AQ5T7M9 428 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 OR7E24Q6IFN5 339 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 HMBOX1Q6NT76 420 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 ZNF613Q6PF04 617 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 TTC33Q6PID6 262 aaPredicted RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 TBPL2Q6SJ96 375 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 SLC22A25Q6T423 547 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 HIST3H2AQ7L7L0 130 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 P2RY8Q86VZ1 359 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 SLC30A8Q8IWU4 369 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 UEVLDQ8IX04 471 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 GPR137CQ8N3F9 429 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 ZNF611Q8N823 705 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 POMGNT2Q8NAT1 580 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 SYT14Q8NB59 555 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 MAPK1IP1LQ8NDC0 245 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 RBM15BQ8NDT2 890 aaKnown RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 MOSPD2Q8NHP6 518 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 PFN4Q8NHR9 129 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 TMEM255BQ8WV15 326 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 HIST1H2ACQ93077 130 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 TMEM45BQ96B21 275 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 HOPXQ9BPY8 73 aaPredicted RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 PRSS27Q9BQR3 290 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 TMEM43Q9BTV4 400 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 OR10A4Q9H209 315 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 C12orf10Q9HB07 376 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 CRLF2Q9HC73 371 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 NGBQ9NPG2 151 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 MEPEQ9NQ76 525 aaPredicted RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 C20orf141Q9NUB4 165 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 BEX4Q9NWD9 120 aaPredicted RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 MRPL39Q9NYK5 338 aaKnown RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 TAS2R16Q9NYV7 291 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 TAS2R5Q9NYW4 299 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 CISD1Q9NZ45 108 aaKnown RBP3.93□□□□□ -1.78
NUP54-206ENST00000508465 ADA2Q9NZK5 511 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 MALT1Q9UDY8 824 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 POU2F3Q9UKI9 436 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 PRDM4Q9UKN5 801 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 MOKQ9UQ07 419 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 B3GALT5Q9Y2C3 310 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 F8P00451 2351 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 ACANP16112 2415 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 USF3Q68DE3 2245 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 MED13LQ71F56 2210 aa3.93□□□□□ -1.78
NUP54-206ENST00000508465 DSCAMO60469 2012 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 IGHV1-18A0A0C4DH31 117 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 LOC102725191A0A1B0GVB3 256 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 AQP12BA6NM10 295 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 FAM220BPB1ANY3 271 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ATP6V1G2-DDX39BF2Z307 99 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 FFAR1O14842 300 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 SLC22A2O15244 555 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ARHGEF9O43307 516 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 CHP2O43745 196 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 FMO6PO60774 539 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 OR7A10O76100 309 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 DIRAS1O95057 198 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 GOSR1O95249 250 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 SERPINA1P01009 418 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 IFNA14P01570 189 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 HLA-HP01893 362 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 CD79AP11912 226 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 THBS4P35443 961 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ACVR1BP36896 505 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 AQP2P41181 271 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 CAPZA2P47755 286 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 UGT2B15P54855 530 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 CDH11P55287 796 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ATP5J2P56134 94 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 UBE2NP61088 152 aaKnown RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 SELENOWP63302 87 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 MYBPC1Q00872 1141 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 POU3F1Q03052 451 aaPredicted RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 RUNX1T1Q06455 604 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 PUDPQ08623 228 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 TNK1Q13470 666 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 VEZF1Q14119 521 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 MELKQ14680 651 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ZNF74Q16587 644 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 CEACAM16Q2WEN9 425 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 TBRG1Q3YBR2 411 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 Q5PR19 223 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 C8orf82Q6P1X6 216 aaPredicted RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 ERICH5Q6P6B1 374 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms