RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MEAF6Q9HAF1 191 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 TMEM216Q9P0N5 145 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 RPS6KB2Q9UBS0 482 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 NDRG4Q9ULP0 352 aaKnown RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 TSSC4Q9Y5U2 329 aaPredicted RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 KPTNQ9Y664 436 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 ABCA13Q86UQ4 5058 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 TRAV36DV7A0A075B6V5 113 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 F5H5P2 479 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 H3BSA7 217 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 SLC25A17O43808 307 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 PROCP04070 461 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 DBIP07108 87 aaKnown RBP5.84□□□□□ -1.47
VCAN-207ENST00000507162 ZNF32P17041 273 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 VDAC2P45880 294 aaPredicted RBP5.84□□□□□ -1.47
VCAN-207ENST00000507162 ZNF84P51523 738 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 PUDPQ08623 228 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 POU4F2Q12837 409 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 OR8B8Q15620 311 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 SGCAQ16586 387 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 LRRC75BQ2VPJ9 315 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 TMEM95Q3KNT9 176 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 CRIP3Q6Q6R5 217 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 SLC22A9Q8IVM8 553 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 PEX5LQ8IYB4 626 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 CMTM4Q8IZR5 234 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 CLIP4Q8N3C7 705 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 OR4A15Q8NGL6 344 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 MIPOL1Q8TD10 442 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 ZNF566Q969W8 418 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 COQ8BQ96D53 544 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 L3HYPDHQ96EM0 354 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 FCRL1Q96LA6 429 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 ZNF607Q96SK3 696 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 ZNF649Q9BS31 505 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 SPATA9Q9BWV2 254 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 CDCA4Q9BXL8 241 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 WNT10AQ9GZT5 417 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 SLC38A1Q9H2H9 487 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 SMURF1Q9HCE7 757 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 UFSP2Q9NUQ7 469 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 MKS1Q9NXB0 559 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 TMED5Q9Y3A6 229 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 CHST2Q9Y4C5 530 aa5.84□□□□□ -1.47
VCAN-207ENST00000507162 MUC4Q99102 2169 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 EXOC1LA0A1B0GW35 172 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 TLDC2A0PJX2 215 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 CDHR4A6H8M9 788 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 A6NJY4 79 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 TMEM114B3SHH9 223 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 F2RL2O00254 374 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 DVL1O14640 695 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 SYNGR1O43759 233 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 OR6A2O95222 327 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 FSTL3O95633 263 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ABHD16AO95870 558 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ECDO95905 644 aaPredicted RBP5.83□□□□□ -1.48
VCAN-207ENST00000507162 LHBP01229 141 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ADORA3P0DMS8 318 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 NR2F1P10589 423 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 G6PDP11413 515 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 KITLGP21583 273 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 CDAP32320 146 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 CHI3L1P36222 383 aaPredicted RBP5.83□□□□□ -1.48
VCAN-207ENST00000507162 MAGEA12P43365 314 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ERFP50548 548 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 PLTPP55058 493 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 PSMA6P60900 246 aaKnown RBP5.83□□□□□ -1.48
VCAN-207ENST00000507162 ERVK-25P63136 954 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 PSG4Q00888 419 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 MELKQ14680 651 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 PTGR1Q14914 329 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 KCNJ8Q15842 424 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ZNF181Q2M3W8 571 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 CFAP157Q5JU67 520 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 CEP85LQ5SZL2 805 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 C1orf94Q6P1W5 598 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ZNF836Q6ZNA1 936 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 Q6ZS46 218 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 SLC35D2Q76EJ3 337 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 PXKQ7Z7A4 578 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 SERPINA11Q86U17 422 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 NUDCD3Q8IVD9 361 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ALDH16A1Q8IZ83 802 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 Q8N2B8 174 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ADPRHL1Q8NDY3 354 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 OR11L1Q8NGX0 322 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 OR13G1Q8NGZ3 307 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 OR52P1PQ8NH57 321 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 OR6X1Q8NH79 312 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 MYDGFQ969H8 173 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 TUBGCP3Q96CW5 907 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 HAVCR1Q96D42 359 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 TRNT1Q96Q11 434 aaKnown RBP5.83□□□□□ -1.48
VCAN-207ENST00000507162 C20orf141Q9NUB4 165 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 GIMAP2Q9UG22 337 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 TMA7Q9Y2S6 64 aaKnown RBP5.83□□□□□ -1.48
VCAN-207ENST00000507162 STARD10Q9Y365 291 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 SMAD5-AS1Q9Y6J3 95 aa5.83□□□□□ -1.48
VCAN-207ENST00000507162 ALMS1Q8TCU4 4167 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms