RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 LRRC37BQ96QE4 947 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 DCLRE1CQ96SD1 692 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 OR2J1Q9GZK6 312 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 NSRP1Q9H0G5 558 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 ZNF446Q9NWS9 450 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 AURKCQ9UQB9 309 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 WIPI2Q9Y4P8 454 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 SNX13Q9Y5W8 968 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 FAM157AC9JC47 383 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 SGCEO43556 437 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 IGHV1-46P01743 117 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 TNFRSF1AP19438 455 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 CPT2P23786 658 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 CRABP1P29762 137 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 GPR4P46093 362 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 PSME3P61289 254 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 KRR1Q13601 381 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 FHL1Q13642 323 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 TSTQ16762 297 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 GLYATQ6IB77 296 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 ZNF774Q6NX45 483 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 DPY19L2P2Q6ZN68 376 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 RFPL4BQ6ZWI9 263 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 FAM122BQ7Z309 247 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 SLC7A13Q8TCU3 470 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 Q96M85 177 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 JMJD8Q96S16 334 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 NARFLQ9H6Q4 476 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 NRIP3Q9NQ35 241 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 KLHL21Q9UJP4 597 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 SIGLEC7Q9Y286 467 aa12.27□□□□□ -0.45
HMGCS1-203ENST00000507004 IFNL4K9M1U5 179 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 CDC42EP2O14613 210 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 IMPA2O14732 288 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 SPRY3O43610 288 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 TIMM8AO60220 97 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 DOK2O60496 412 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 PTP4A3O75365 173 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 MPZL1O95297 269 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 IFNGR2P38484 337 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 HTR5AP47898 357 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 MVKQ03426 396 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 GLO1Q04760 184 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 FGD3Q5JSP0 725 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 GLB1L2Q8IW92 636 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 OR5L1Q8NGL2 311 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 CCL17Q92583 94 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 GAL3ST1Q99999 423 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 METTL17Q9H7H0 456 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 GORASP2Q9H8Y8 452 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 DCAF13Q9NV06 445 aaKnown RBP12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 PLEK2Q9NYT0 353 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 VSX1Q9NZR4 365 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 NDUFAF4Q9P032 175 aa12.26□□□□□ -0.45
HMGCS1-203ENST00000507004 PPIAL4EA0A075B759 164 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 PPIAL4CA0A0B4J2A2 164 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 PPIAL4DF5H284 164 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 FOXH1O75593 365 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 UBOX5O94941 541 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 TXNDC12O95881 172 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 IGHV2-5P01817 119 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 PPIAL4FP0DN26 164 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 KITLGP21583 273 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 MPV17P39210 176 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 LIMS1P48059 325 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 TNFAIP6P98066 277 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 SPATS1Q496A3 300 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 MESTQ5EB52 335 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 SPATA46Q5T0L3 261 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 SLC27A4Q6P1M0 643 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 FAHD2BQ6P2I3 314 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 TBPL2Q6SJ96 375 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 USP43Q70EL4 1123 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 SPICQ8N5J4 248 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 CLDN22Q8N7P3 220 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 ST7LQ8TDW4 575 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 PTP4A1Q93096 173 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 MCUR1Q96AQ8 359 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 RASD2Q96D21 266 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 FAHD2AQ96GK7 314 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 FAM46AQ96IP4 442 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 RSRC1Q96IZ7 334 aaKnown RBP12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 DHRS1Q96LJ7 313 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 SAMD8Q96LT4 415 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 MYLK2Q9H1R3 596 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 LPAR2Q9HBW0 351 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 NDE1Q9NXR1 346 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 ADA2Q9NZK5 511 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 MAGEL2Q9UJ55 1249 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 ADAM18Q9Y3Q7 739 aa12.25□□□□□ -0.45
HMGCS1-203ENST00000507004 OR6C6A6NF89 314 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 UNC119BA6NIH7 251 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 ZSCAN5BA6NJL1 495 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 SLC16A7O60669 478 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 DEAF1O75398 565 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 NGFP01138 241 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 RAC2P15153 192 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 CTLA4P16410 223 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 OMPP47874 163 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms