RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ITLN1Q8WWA0 313 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 DNAJC9Q8WXX5 260 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR5P2Q8WZ92 322 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LZICQ8WZA0 190 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GTF2H4Q92759 462 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 N4BP2L2Q92802 583 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 NAT6Q93015 286 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 TOMM40LQ969M1 308 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CCDC124Q96CT7 223 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 MRPL53Q96EL3 112 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 C11orf24Q96F05 449 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PDXPQ96GD0 296 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 C5orf30Q96GV9 206 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 NSMCE2Q96MF7 247 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF578Q96N58 590 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 TSSK3Q96PN8 268 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF607Q96SK3 696 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 HBEGFQ99075 208 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CGREF1Q99674 301 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF184Q99676 751 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PELOQ9BRX2 385 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 C9orf16Q9BUW7 83 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ACAT2Q9BWD1 397 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 MS4A8Q9BY19 250 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CHRNA10Q9GZZ6 450 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 RAB33BQ9H082 229 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 KAT8Q9H7Z6 458 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 AKIRIN1Q9H9L7 192 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 TPT1P8Q9HAU6 139 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 IL1RL2Q9HB29 575 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CACYBPQ9HB71 228 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LYRM4Q9HD34 91 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 TM9SF3Q9HD45 589 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 BATF3Q9NR55 127 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 FAM212BQ9NTI7 297 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CLEC5AQ9NY25 188 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 TAS2R9Q9NYW1 312 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CD300AQ9UGN4 299 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PHF11Q9UIL8 331 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 FBXW2Q9UKT8 454 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 DIMT1Q9UNQ2 313 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 MRPS33Q9Y291 106 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 POLR3HQ9Y535 204 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LRRC42Q9Y546 428 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC22A7Q9Y694 548 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PIEZO1Q92508 2521 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF638Q14966 1978 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 DOCK4Q8N1I0 1966 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PTPRSQ13332 1948 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 MTCL1Q9Y4B5 1905 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 UNC79Q9P2D8 2635 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 NUP210Q8TEM1 1887 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CHD5Q8TDI0 1954 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 HELZP42694 1942 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ANAPC1Q9H1A4 1944 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 A0A0A6YYD5 115 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RNF103-CHMP3A0A140T963 221 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TCRBV3S1A0A5B6 114 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TLCD2A6NGC4 264 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 FAM220BPB1ANY3 271 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 C5orf58C9J3I9 102 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 G3V2T6 193 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 FXYD1O00168 92 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SAP18O00422 153 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 BTN3A3O00478 584 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CXCR6O00574 342 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 NME4O00746 187 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PLPP1O14494 284 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PHOX2AO14813 284 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ERI3O43414 337 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 DUX1O43812 170 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 DPM1O60762 260 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OR6A2O95222 327 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 LRATO95237 230 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CPSF4O95639 269 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TXNDC12O95881 172 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PROS1P07225 676 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 DCNP07585 359 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 IL3P08700 152 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 HBQ1P09105 142 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 IFI6P09912 130 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 LAMP1P11279 417 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 UGT2B7P16662 529 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 GGT1P19440 569 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ATP6V1C1P21283 382 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CPN2P22792 545 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ATP5A1P25705 553 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 AK4P27144 223 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 IL12AP29459 219 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 KDELR2P33947 212 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ID1P41134 155 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CRATP43155 626 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CAPZBP47756 277 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CSNK1EP49674 416 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 HLCSP50747 726 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 DUSP3P51452 185 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RIDAP52758 137 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PLA2G16P53816 162 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ATXN3P54252 364 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SMIM11AP58511 58 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms