RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 BEX1Q9HBH7 125 aa2.04□□□□□ -2.08
CHD1-203ENST00000505657 CRLF2Q9HC73 371 aa2.04□□□□□ -2.08
CHD1-203ENST00000505657 CENPJQ9HC77 1338 aaPredicted RBP2.04□□□□□ -2.08
CHD1-203ENST00000505657 KCNJ16Q9NPI9 418 aa2.04□□□□□ -2.08
CHD1-203ENST00000505657 ZNF355PQ9NSJ1 428 aa2.04□□□□□ -2.08
CHD1-203ENST00000505657 PDP1Q9P0J1 537 aaPredicted RBP2.04□□□□□ -2.08
CHD1-203ENST00000505657 ING4Q9UNL4 249 aa2.04□□□□□ -2.08
CHD1-203ENST00000505657 C2orf16Q68DN1 1984 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 BRCA1P38398 1863 aaKnown RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 ZNF816-ZNF321PA0A0X1KG74 233 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 SUPT3HB4E1H0 165 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 EEDO75530 441 aaKnown RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 CTAG2O75638 210 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 CLPXO76031 633 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 OR2F2O95006 317 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 SERPINA5P05154 406 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 FABP3P05413 133 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 ERCC1P07992 297 aaPredicted RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 MYL2P10916 166 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 EIF2S2P20042 333 aaKnown RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 BCKDHBP21953 392 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 AK4P27144 223 aaPredicted RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 SERPINB5P36952 375 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 RPS5P46782 204 aaKnown RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 UGT2B15P54855 530 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 ESRRGP62508 458 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 ZSCAN26Q16670 478 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 KRTAP13-2Q52LG2 175 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 TWF2Q6IBS0 349 aaKnown RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 CEMP1Q6PRD7 247 aaPredicted RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 NTM-AS1Q6ZSK4 140 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 PDIK1LQ8N165 341 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 LYPD1Q8N2G4 141 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 OR4C5Q8NGB2 326 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 CAPSLQ8WWF8 208 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 PIBF1Q8WXW3 757 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 NRGNQ92686 78 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 PEX13Q92968 403 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 ECHDC3Q96DC8 303 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 TGS1Q96RS0 853 aaKnown RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 KCTD14Q9BQ13 255 aaPredicted RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 LINC00597Q9H2U6 94 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 NCOR1P1Q9H4R4 102 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 CCNB1IP1Q9NPC3 277 aa2.03□□□□□ -2.08
CHD1-203ENST00000505657 RPRD1BQ9NQG5 326 aaKnown RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 UXTQ9UBK9 157 aaPredicted RBP2.03□□□□□ -2.08
CHD1-203ENST00000505657 TSPOAP1O95153 1857 aa2.03□□□□□ -2.09
CHD1-203ENST00000505657 CAMTA1Q9Y6Y1 1673 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 GPR179Q6PRD1 2367 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 GPATCH8Q9UKJ3 1502 aaKnown RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 DOCK8Q8NF50 2099 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 IGKV1D-17A0A075B6S4 117 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 IGHV3-74A0A0B4J1X5 117 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 IGHV5-10-1A0A0J9YXX1 117 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 CDC7O00311 574 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 BET1O15155 118 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 AKR7A2O43488 359 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 HUS1O60921 280 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 GABARAPO95166 117 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 ACSM4P0C7M7 580 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 STAG3L3P0CL85 134 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 IGHV1-8P0DP01 117 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 CALM1P0DP23 149 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 CALM2P0DP24 149 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 CALM3P0DP25 149 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 PSMC3P17980 439 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 CELP19835 753 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 GSTM3P21266 225 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 OTX1P32242 354 aaPredicted RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 SLC1A1P43005 524 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 TNNT2P45379 298 aaPredicted RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 CX3CR1P49238 355 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 SSR4P51571 173 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 RAB10P61026 200 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 NUTF2P61970 127 aaKnown RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 ERCC8Q13216 396 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 ZNF684Q5T5D7 378 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 FBXW9Q5XUX1 488 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 ZNF880Q6PDB4 577 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 SLC25A34Q6PIV7 304 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 TMCO2Q7Z6W1 182 aaPredicted RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 SCD5Q86SK9 330 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 WDR86Q86TI4 376 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 MMAAQ8IVH4 418 aaKnown RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 KATNAL2Q8IYT4 538 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 GABRG1Q8N1C3 465 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 PRELID2Q8N945 189 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 ZNF461Q8TAF7 563 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 DUS3LQ96G46 650 aaKnown RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 GSDMAQ96QA5 445 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 RETNQ9HD89 108 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 C20orf96Q9NUD7 363 aaPredicted RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 GGA2Q9UJY4 613 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 TBC1D24Q9ULP9 559 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 GOLT1BQ9Y3E0 138 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 COL27A1Q8IZC6 1860 aaPredicted RBP2.02□□□□□ -2.09
CHD1-203ENST00000505657 TUBGCP6Q96RT7 1819 aa2.02□□□□□ -2.09
CHD1-203ENST00000505657 PLA2R1Q13018 1463 aa2.01□□□□□ -2.09
CHD1-203ENST00000505657 IGLV2-18A0A075B6J9 118 aa2.01□□□□□ -2.09
CHD1-203ENST00000505657 GLYATL1P3A0A0U1RQE8 302 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms