RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 NUP50Q9UKX7 468 aa4.92□□□□□ -1.62
GYPB-205ENST00000505583 CORO2BQ9UQ03 480 aa4.92□□□□□ -1.62
GYPB-205ENST00000505583 POLR3KQ9Y2Y1 108 aaPredicted RBP4.92□□□□□ -1.62
GYPB-205ENST00000505583 NDUFAF1Q9Y375 327 aa4.92□□□□□ -1.62
GYPB-205ENST00000505583 INSIG2Q9Y5U4 225 aa4.92□□□□□ -1.62
GYPB-205ENST00000505583 NPTNQ9Y639 398 aa4.92□□□□□ -1.62
GYPB-205ENST00000505583 TRRAPQ9Y4A5 3859 aa4.92□□□□□ -1.62
GYPB-205ENST00000505583 PPIAL4EA0A075B759 164 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ELOA3CA0A087WX78 387 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 PPIAL4CA0A0B4J2A2 164 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 IGHV3-64DA0A0J9YX35 117 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 PLSCR5A0PG75 271 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 CENPBD1B2RD01 187 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 F5H0A9 414 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 PPIAL4DF5H284 164 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 H7C1C5 153 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 FXYD1O00168 92 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 IMPA2O14732 288 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ENTPD5O75356 428 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 FOXH1O75593 365 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ZNF205O95201 554 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 IGHMP01871 453 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 MT-ND5P03915 603 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 RNASE1P07998 156 aaKnown RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 PPIAL4FP0DN26 164 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 THRBP10828 461 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 SELEP16581 610 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ZNF26P17031 533 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 MDKP21741 143 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 OMGP23515 440 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 DAP3P51398 398 aaKnown RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 TAS2R41P59536 307 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 LCN6P62502 163 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 HOXA4Q00056 320 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 PAX2Q02962 417 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 DBPQ10586 325 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 FOXL1Q12952 345 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 BAMBIQ13145 260 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 NFYCQ13952 458 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 SLC9A3R2Q15599 337 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 MOGQ16653 247 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 PDLIM3Q53GG5 364 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 ALG10Q5BKT4 473 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ARMCX4Q5H9R4 360 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 MTX3Q5HYI7 312 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 BEND6Q5SZJ8 279 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 NANOGP8Q6NSW7 305 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 LEG1Q6P5S2 330 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 FOXL2NBQ6ZUU3 175 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 CCDC80Q76M96 950 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 PATL1Q86TB9 770 aaKnown RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 LRRC28Q86X40 367 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 CALHM3Q86XJ0 350 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ZNF283Q8N7M2 679 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 OR2Z1Q8NG97 314 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ZNF420Q8TAQ5 688 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 LRRC8CQ8TDW0 803 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ST7LQ8TDW4 575 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 TMEM239Q8WW34 195 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 ITLN1Q8WWA0 313 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 POP5Q969H6 163 aaKnown RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 DACT3Q96B18 629 aaPredicted RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 C4orf45Q96LM5 186 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 EGLN1Q9GZT9 426 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 TXNIPQ9H3M7 391 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 SMURF2Q9HAU4 748 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 NTN4Q9HB63 628 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 PATZ1Q9HBE1 687 aaKnown RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 TMEM106BQ9NUM4 274 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 PLEK2Q9NYT0 353 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 EIF3KQ9UBQ5 218 aaKnown RBP4.91□□□□□ -1.62
GYPB-205ENST00000505583 SNX13Q9Y5W8 968 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 AUP1Q9Y679 476 aa4.91□□□□□ -1.62
GYPB-205ENST00000505583 TRAV27A0A087WT01 109 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 A0A1W2PPL8 197 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 NPIPB13A6NJU9 1138 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 CEACAM18A8MTB9 384 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 A8MXK9 166 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 NPIPB4C9JG80 1138 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 J3KTA2 159 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 ANGPT2O15123 496 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 TIMM8AO60220 97 aaPredicted RBP4.9□□□□□ -1.63
GYPB-205ENST00000505583 OR5F1O95221 314 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 GPANK1O95872 356 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 CYB5R3P00387 301 aaPredicted RBP4.9□□□□□ -1.63
GYPB-205ENST00000505583 CST2P09228 141 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 WNT2P09544 360 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 IFI30P13284 250 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 LIPAP38571 399 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 RBM34P42696 430 aaKnown RBP4.9□□□□□ -1.63
GYPB-205ENST00000505583 YAP1P46937 504 aaKnown RBP4.9□□□□□ -1.63
GYPB-205ENST00000505583 CTXN1P60606 82 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 RPL27P61353 136 aaKnown RBP4.9□□□□□ -1.63
GYPB-205ENST00000505583 BTG1P62324 171 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 PAX8Q06710 450 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 SLC3A1Q07837 685 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 HLXQ14774 488 aaPredicted RBP4.9□□□□□ -1.63
GYPB-205ENST00000505583 TAF11Q15544 211 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 TMEM155Q4W5P6 130 aa4.9□□□□□ -1.63
GYPB-205ENST00000505583 TTMPQ5BVD1 217 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms