RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 NDUFB6O95139 128 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 IGHG1P01857 330 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 H2BFMP0C1H6 154 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 IGFBP3P17936 291 aaPredicted RBP10.72□□□□□ -0.69
NUP54-202ENST00000502850 MMP16P51512 607 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 RBMS2Q15434 407 aaKnown RBP10.72□□□□□ -0.69
NUP54-202ENST00000502850 EXT1Q16394 746 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 ST3GAL2Q16842 350 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 ODF4Q2M2E3 257 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 PHF19Q5T6S3 580 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 OR5M10Q6IEU7 315 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 FAM166AQ6J272 317 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 TMEM81Q6P7N7 255 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 ARSKQ6UWY0 536 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 DCXRQ7Z4W1 244 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 ADGRE4PQ86SQ3 457 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 C9orf62Q8N4C0 152 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 OR11G2Q8NGC1 345 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 OR4K17Q8NGC6 315 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 IFI44Q8TCB0 444 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 ST7LQ8TDW4 575 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 ZNF431Q8TF32 576 aaPredicted RBP10.72□□□□□ -0.69
NUP54-202ENST00000502850 RNF133Q8WVZ7 376 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 PMEPA1Q969W9 287 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 SLC25A44Q96H78 314 aaPredicted RBP10.72□□□□□ -0.69
NUP54-202ENST00000502850 ARL5BQ96KC2 179 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 SLCO5A1Q9H2Y9 848 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 HDGFL3Q9Y3E1 203 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 BOLA1Q9Y3E2 137 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 B3GALT1Q9Y5Z6 326 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 NPTNQ9Y639 398 aa10.72□□□□□ -0.69
NUP54-202ENST00000502850 A0A087WV48 116 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 LOC102723996A0A087X1L8 192 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 LOC107986453A0A1B0GWG9 222 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 A0A1W2PQ72 361 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 C9J4A7 227 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 CREBL2O60519 120 aaPredicted RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 GMDSO60547 372 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 OR2J2O76002 312 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 SCGNO76038 276 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 CER1O95813 267 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 PNPP00491 289 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 KLK3P07288 261 aaPredicted RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 ITGA5P08648 1049 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 CD37P11049 281 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 HLA-DOBP13765 273 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 HTR2CP28335 458 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 PRSS3P35030 304 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 CLRN1P58418 232 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 MFGE8Q08431 387 aaPredicted RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 MYBPHQ13203 477 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 ETFDHQ16134 617 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 ZNF239Q16600 458 aaKnown RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 PEAR1Q5VY43 1037 aaPredicted RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 SFRP4Q6FHJ7 346 aaPredicted RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 SLC25A25Q6KCM7 469 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 OPN5Q6U736 354 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 LYPD8Q6UX82 237 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 GLDNQ6ZMI3 551 aaPredicted RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 C16orf47Q6ZP98 133 aaPredicted RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 RHOUQ7L0Q8 258 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 CDH26Q8IXH8 852 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 SPICQ8N5J4 248 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 NOXO1Q8NFA2 376 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 OR51D1Q8NGF3 324 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 C1orf198Q9H425 327 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 NOX3Q9HBY0 568 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 KLK11Q9UBX7 282 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 ZNF107Q9UII5 783 aaPredicted RBP10.71□□□□□ -0.69
NUP54-202ENST00000502850 SLC22A13Q9Y226 551 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 EMC9Q9Y3B6 208 aa10.71□□□□□ -0.69
NUP54-202ENST00000502850 PCNX3Q9H6A9 2034 aa10.71□□□□□ -0.7
NUP54-202ENST00000502850 FRYLO94915 3013 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 TMEM269A0A1B0GVZ9 245 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 UBE2QL1A1L167 161 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 H3BML4 177 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 ARPC1BO15143 372 aaKnown RBP10.7□□□□□ -0.7
NUP54-202ENST00000502850 ZNF354AO60765 605 aaPredicted RBP10.7□□□□□ -0.7
NUP54-202ENST00000502850 WISP1O95388 367 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 AKAIN1P0CW23 69 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 GABRA1P14867 456 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 IL11P20809 199 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 SDHBP21912 280 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 PTGDSP41222 190 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 BIDP55957 195 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 SPEM2Q0P670 501 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 RSPO4Q2I0M5 234 aaPredicted RBP10.7□□□□□ -0.7
NUP54-202ENST00000502850 PCGF3Q3KNV8 242 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 C2orf76Q3KRA6 126 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 FAM198BQ6UWH4 519 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 PIAS4Q8N2W9 510 aaPredicted RBP10.7□□□□□ -0.7
NUP54-202ENST00000502850 MEIOBQ8N635 442 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 FADS6Q8N9I5 356 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 AGBL5Q8NDL9 886 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 OR2M3Q8NG83 312 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 OR10G3Q8NGC4 313 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 OR1J4Q8NGS1 313 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 ELP5Q8TE02 316 aa10.7□□□□□ -0.7
NUP54-202ENST00000502850 ASB13Q8WXK3 278 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms