RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 GPR139Q6DWJ6 353 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 SMARCD3Q6STE5 483 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 RINLQ6ZS11 566 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 SYT9Q86SS6 491 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 CLDND2Q8NHS1 167 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 KLF14Q8TD94 323 aaPredicted RBP13.74□□□□□ -0.21
NR1H3-227ENST00000498548 SLC7A6Q92536 515 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 NSL1Q96IY1 281 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 SAMD8Q96LT4 415 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 GPX7Q96SL4 187 aaPredicted RBP13.74□□□□□ -0.21
NR1H3-227ENST00000498548 SRA1Q9HD15 236 aaKnown RBP13.74□□□□□ -0.21
NR1H3-227ENST00000498548 TREM2Q9NZC2 230 aa13.74□□□□□ -0.21
NR1H3-227ENST00000498548 VSX1Q9NZR4 365 aaPredicted RBP13.74□□□□□ -0.21
NR1H3-227ENST00000498548 DCTN6O00399 190 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 SGCEO43556 437 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 AHCYL1O43865 530 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 DOK2O60496 412 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 RP2O75695 350 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 IFNA2P01563 188 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 FAM157CP0CG43 387 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 ATP6V1B2P21281 511 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 HTR5AP47898 357 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 ZNF81P51508 661 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 HNRNPA0Q13151 305 aaKnown RBP13.73□□□□□ -0.21
NR1H3-227ENST00000498548 MEP1BQ16820 701 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 RFX4Q33E94 735 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 AVPI1Q5T686 147 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 VASH1Q7L8A9 365 aaPredicted RBP13.73□□□□□ -0.21
NR1H3-227ENST00000498548 FANK1Q8TC84 345 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 OR52D1Q9H346 318 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 IL1RAPQ9NPH3 570 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 GRIP1Q9Y3R0 1128 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 CACNG2Q9Y698 323 aa13.73□□□□□ -0.21
NR1H3-227ENST00000498548 SVEP1Q4LDE5 3571 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 ABHD16AO95870 558 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 TXNDC12O95881 172 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 IGHV1-46P01743 117 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 RBMXP38159 391 aaKnown RBP13.72□□□□□ -0.21
NR1H3-227ENST00000498548 MMP15P51511 669 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 MVKQ03426 396 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 SCRN3Q0VDG4 424 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 PPP1R8Q12972 351 aaKnown RBP13.72□□□□□ -0.21
NR1H3-227ENST00000498548 MOGQ16653 247 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 CR1LQ2VPA4 569 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 CCDC92Q53HC0 331 aaPredicted RBP13.72□□□□□ -0.21
NR1H3-227ENST00000498548 SPRNQ5BIV9 151 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 C1orf94Q6P1W5 598 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 LEG1Q6P5S2 330 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 USP51Q70EK9 711 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 GLB1L2Q8IW92 636 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 LINC01356Q8N9X3 169 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 OR4K13Q8NH42 304 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 GNPDA2Q8TDQ7 276 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 NMNAT3Q96T66 252 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 IFT27Q9BW83 186 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 ELOVL3Q9HB03 270 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 LPAR2Q9HBW0 351 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 DECR2Q9NUI1 292 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 NDE1Q9NXR1 346 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 PLEK2Q9NYT0 353 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 ASH2LQ9UBL3 628 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 LPAR3Q9UBY5 353 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 TMCC3Q9ULS5 477 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 B9D1Q9UPM9 204 aa13.72□□□□□ -0.21
NR1H3-227ENST00000498548 ZSCAN5BA6NJL1 495 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 FAM157AC9JC47 383 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 RER1O15258 196 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 DBHP09172 617 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 HIST1H1CP16403 213 aaKnown RBP13.71□□□□□ -0.21
NR1H3-227ENST00000498548 SLC6A6P31641 620 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 GSSP48637 474 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 ARHGDIAP52565 204 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 CDH15P55291 814 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 TMEM33P57088 247 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 SRSF2Q01130 221 aaKnown RBP13.71□□□□□ -0.21
NR1H3-227ENST00000498548 AQP6Q13520 282 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 PCGF3Q3KNV8 242 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 SLC35F1Q5T1Q4 408 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 MBNL2Q5VZF2 373 aaKnown RBP13.71□□□□□ -0.21
NR1H3-227ENST00000498548 PGBD2Q6P3X8 592 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 CORO6Q6QEF8 472 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 UNQ6126/PRO20091Q6UXV3 157 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 CXXC5Q7LFL8 322 aaKnown RBP13.71□□□□□ -0.21
NR1H3-227ENST00000498548 OR9Q2Q8NGE9 314 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 HPS1Q92902 700 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 FN3KQ9H479 309 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 MSL2Q9HCI7 577 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 NKIRAS2Q9NYR9 191 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 ACTR3BQ9P1U1 418 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
NR1H3-227ENST00000498548 STARD10Q9Y365 291 aa13.71□□□□□ -0.21
NR1H3-227ENST00000498548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.71□□□□□ -0.216e-6■□□□□ 9.4
NR1H3-227ENST00000498548 IGHV1-69-2A0A0G2JMI3 117 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 TCRBV5S2A0A599 114 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 TNFRSF11BO00300 401 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 MT-ND5P03915 603 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 T-ENOLP0DO92 83 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 COX5BP10606 129 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 SRD5A1P18405 259 aa13.7□□□□□ -0.22
NR1H3-227ENST00000498548 FPR3P25089 353 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms