RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 WNK1Q9H4A3 2382 aa13.49□□□□□ -0.25
MUC1-220ENST00000498431 CCDC22O60826 627 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 TNFRSF1BP20333 461 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 PCGF2P35227 344 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 PAX2Q02962 417 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 TOP3AQ13472 1001 aaPredicted RBP13.48□□□□□ -0.25
MUC1-220ENST00000498431 TAF11Q15544 211 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 ZMAT1Q5H9K5 638 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 UNQ6126/PRO20091Q6UXV3 157 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 SPATC1Q76KD6 591 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 HDDC2Q7Z4H3 204 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 OR2Z1Q8NG97 314 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 ITLN1Q8WWA0 313 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 SGTBQ96EQ0 304 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 SAMD8Q96LT4 415 aa13.48□□□□□ -0.25
MUC1-220ENST00000498431 PDP1Q9P0J1 537 aaPredicted RBP13.48□□□□□ -0.25
MUC1-220ENST00000498431 A0A0G2JK05 382 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 CEACAM18A8MTB9 384 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 SCG5P05408 212 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 CST2P09228 141 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 ERFP50548 548 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 ENDOGQ14249 297 aaKnown RBP13.47□□□□□ -0.25
MUC1-220ENST00000498431 ESCO2Q56NI9 601 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 C9orf139Q6ZV77 190 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 DHDDSQ86SQ9 333 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 C1orf174Q8IYL3 243 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 CGREF1Q99674 301 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 TXNIPQ9H3M7 391 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 ELOVL3Q9HB03 270 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 SAR1AQ9NR31 198 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 OR5V1Q9UGF6 321 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
MUC1-220ENST00000498431 TRAV40A0A0B4J280 105 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 PIP5K1CO60331 668 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 ZNF205O95201 554 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 PLATP00750 562 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 TNFRSF1AP19438 455 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 MTNR1AP48039 350 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 ARHGDIAP52565 204 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 C16orf87Q6PH81 154 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 FOXL2NBQ6ZUU3 175 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 PATL1Q86TB9 770 aaKnown RBP13.46□□□□□ -0.25
MUC1-220ENST00000498431 ALDH16A1Q8IZ83 802 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 BCAS4Q8TDM0 211 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 SLC26A7Q8TE54 656 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 TMEM239Q8WW34 195 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 WFDC12Q8WWY7 111 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 KAT8Q9H7Z6 458 aaKnown RBP13.46□□□□□ -0.25
MUC1-220ENST00000498431 STX18Q9P2W9 335 aaKnown RBP13.46□□□□□ -0.25
MUC1-220ENST00000498431 PPP1R3CQ9UQK1 317 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 MMP24Q9Y5R2 645 aa13.46□□□□□ -0.25
MUC1-220ENST00000498431 A0A1W2PPL8 197 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 NPIPB13A6NJU9 1138 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 NPIPB4C9JG80 1138 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 TMEM178BH3BS89 294 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 NDUFAB1O14561 156 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 HOXA3O43365 443 aaPredicted RBP13.45□□□□□ -0.26
MUC1-220ENST00000498431 ABHD16AO95870 558 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 WNT2P09544 360 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 THRBP10828 461 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 TNFSF4P23510 183 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 MDH2P40926 338 aaKnown RBP13.45□□□□□ -0.26
MUC1-220ENST00000498431 MMP16P51512 607 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 ZER1Q7Z7L7 766 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 IGFN1Q86VF2 1251 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 KIR3DL3Q8N743 410 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 CCDC197Q8NCU1 140 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 LIPHQ8WWY8 451 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 DACT3Q96B18 629 aaPredicted RBP13.45□□□□□ -0.26
MUC1-220ENST00000498431 UPRTQ96BW1 309 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 CMBLQ96DG6 245 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 OR2V2Q96R30 315 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 ALG12Q9BV10 488 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 SSBP3Q9BWW4 388 aaPredicted RBP13.45□□□□□ -0.26
MUC1-220ENST00000498431 IL19Q9UHD0 177 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 RIMS3Q9UJD0 308 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 LRCH1Q9Y2L9 728 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 STARD10Q9Y365 291 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 SH3GLB1Q9Y371 365 aa13.45□□□□□ -0.26
MUC1-220ENST00000498431 IGHV2-70DA0A0C4DH43 119 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 FAM181BA6NEQ2 426 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 SLC22A2O15244 555 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 IGF2P01344 180 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 PPIAL4GP0DN37 164 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 GSTM3P21266 225 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 KITLGP21583 273 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 RBM34P42696 430 aaKnown RBP13.44□□□□□ -0.26
MUC1-220ENST00000498431 GZMMP51124 257 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 TAS2R41P59536 307 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 RPL27P61353 136 aaKnown RBP13.44□□□□□ -0.26
MUC1-220ENST00000498431 RELBQ01201 579 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 KLF10Q13118 480 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 PIN1Q13526 163 aaPredicted RBP13.44□□□□□ -0.26
MUC1-220ENST00000498431 OCLNQ16625 522 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 DEFB112Q30KQ8 113 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 ALG10Q5BKT4 473 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 BRD3OSQ6XYD6 125 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 DPP10Q8N608 796 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 POU5F2Q8N7G0 328 aa13.44□□□□□ -0.26
MUC1-220ENST00000498431 OR10A6Q8NH74 314 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms