RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 ZIM2Q9NZV7 527 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 STX18Q9P2W9 335 aaKnown RBP9.73□□□□□ -0.85
CDK9-205ENST00000498339 HAO1Q9UJM8 370 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 SLC7A7Q9UM01 511 aa9.73□□□□□ -0.85
CDK9-205ENST00000498339 IGHV3-64DA0A0J9YX35 117 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 KIR2DS1A0A191URI9 304 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 A0A1W2PPL8 197 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 C5orf63A6NC05 138 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 GMNCA6NCL1 334 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 CENPBD1B2RD01 187 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 IFNL4K9M1U5 179 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 SFTPBP07988 381 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 ASAH2BP0C7U1 165 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 NR2C1P13056 603 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 LAP3P28838 519 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 PCBD1P61457 104 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 TOP3AQ13472 1001 aaPredicted RBP9.72□□□□□ -0.85
CDK9-205ENST00000498339 ENTPD8Q5MY95 495 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 DHRS7BQ6IAN0 325 aaPredicted RBP9.72□□□□□ -0.85
CDK9-205ENST00000498339 Q6ZR03 302 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 REC114Q7Z4M0 266 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 PTOV1Q86YD1 416 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 GTF2H4Q92759 462 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 TMEM246Q9BRR3 403 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 CDADC1Q9BWV3 514 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 MRPL13Q9BYD1 178 aaKnown RBP9.72□□□□□ -0.85
CDK9-205ENST00000498339 ROPN1BQ9BZX4 212 aaPredicted RBP9.72□□□□□ -0.85
CDK9-205ENST00000498339 EVA1AQ9H8M9 152 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 ROPN1Q9HAT0 212 aaPredicted RBP9.72□□□□□ -0.85
CDK9-205ENST00000498339 INIPQ9NRY2 104 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 ACOXLQ9NUZ1 547 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 NDRG4Q9ULP0 352 aaKnown RBP9.72□□□□□ -0.85
CDK9-205ENST00000498339 UGT2A1Q9Y4X1 527 aa9.72□□□□□ -0.85
CDK9-205ENST00000498339 IGKV1D-43A0A0B4J1Z2 117 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 BTBD17A6NE02 478 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 LRRC30A6NM36 301 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 H0YL77 283 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 P2RY10O00398 339 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 HDAC3O15379 428 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 TOX4O94842 621 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 OPN1SWP03999 348 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 IRF2P14316 349 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 CPT2P23786 658 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 HTR5AP47898 357 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 UGT2B15P54855 530 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 GUCY1A3Q02108 690 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 ZNF404Q494X3 552 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 C1orf94Q6P1W5 598 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 GDPGP1Q6ZNW5 385 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 MOGAT3Q86VF5 341 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 C1orf87Q8N0U7 546 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 ADAMTS16Q8TE57 1224 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 DACT3Q96B18 629 aaPredicted RBP9.71□□□□□ -0.86
CDK9-205ENST00000498339 CMBLQ96DG6 245 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 TRIM15Q9C019 465 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 MMADHCQ9H3L0 296 aaPredicted RBP9.71□□□□□ -0.86
CDK9-205ENST00000498339 SMURF2Q9HAU4 748 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 TMEM165Q9HC07 324 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 TIMM10BQ9Y5J6 103 aa9.71□□□□□ -0.86
CDK9-205ENST00000498339 TRAPPC13A5PLN9 417 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 PHYHO14832 338 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 TNFRSF13BO14836 293 aaPredicted RBP9.7□□□□□ -0.86
CDK9-205ENST00000498339 DOK2O60496 412 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 ICMTO60725 284 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 CST2P09228 141 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 KITLGP21583 273 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 PPIBP23284 216 aaKnown RBP9.7□□□□□ -0.86
CDK9-205ENST00000498339 CFHR2P36980 270 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 AQP2P41181 271 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 SRP9P49458 86 aaKnown RBP9.7□□□□□ -0.86
CDK9-205ENST00000498339 ERFP50548 548 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 ZNF133P52736 654 aaPredicted RBP9.7□□□□□ -0.86
CDK9-205ENST00000498339 EGR3Q06889 387 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 FAM201AQ5SY85 155 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 FAM27BQ5VT28 67 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 METTL11BQ5VVY1 283 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 WDR25Q64LD2 544 aaPredicted RBP9.7□□□□□ -0.86
CDK9-205ENST00000498339 LINC00114Q6XXX2 140 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 Q6ZSV7 163 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 C10orf111Q8N326 155 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 OR6T1Q8NGN1 323 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 LRTOMTQ8WZ04 291 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 HDAC2Q92769 488 aaKnown RBP9.7□□□□□ -0.86
CDK9-205ENST00000498339 LHX4Q969G2 390 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 MEGF10Q96KG7 1140 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 SEPHS2Q99611 448 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 DPAGT1Q9H3H5 408 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 KCNK9Q9NPC2 374 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 SDR39U1Q9NRG7 319 aaPredicted RBP9.7□□□□□ -0.86
CDK9-205ENST00000498339 SLC25A37Q9NYZ2 338 aa9.7□□□□□ -0.86
CDK9-205ENST00000498339 IGHV1-69DA0A0B4J2H0 117 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 A0A0U1RQK1 487 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 CENPVL3A0A0U1RRI6 287 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 C12orf71A8MTZ7 269 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 C22orf46C9J442 243 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 UBDO15205 165 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 RGS16O15492 202 aaPredicted RBP9.69□□□□□ -0.86
CDK9-205ENST00000498339 OR7A10O76100 309 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 IGHV1-69P01742 117 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 OPN1MWP04001 364 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms