RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 IMMP1LQ96LU5 166 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 MRPL13Q9BYD1 178 aaKnown RBP11.64□□□□□ -0.55
GARNL3-220ENST00000496711 STMN3Q9NZ72 180 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 EMC3Q9P0I2 261 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 HS3ST3B1Q9Y662 390 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 TMEM269A0A1B0GVZ9 245 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 A0A1W2PQ72 361 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 GGT3PA6NGU5 568 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 TRAF3IP2O43734 574 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 PEX14O75381 377 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 KLF7O75840 302 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 IGHG1P01857 330 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 OPN1LWP04000 364 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 PGA4P0DJD7 388 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 PGA3P0DJD8 388 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 FKBP2P26885 142 aaKnown RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 DNASE1L1P49184 302 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 FOXK1P85037 733 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 SIGLEC14Q08ET2 396 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 TMEM255AQ5JRV8 349 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 THEM4Q5T1C6 240 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 SFRP4Q6FHJ7 346 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 FAM166AQ6J272 317 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 LRFN4Q6PJG9 635 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 CORO6Q6QEF8 472 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 FGD2Q7Z6J4 655 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 PLCZ1Q86YW0 608 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 PLPP7Q8NBV4 271 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 OR11H7Q8NGC8 314 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 M1APQ8TC57 530 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 EMC7Q9NPA0 242 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 SLC17A5Q9NRA2 495 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 HDGFL3Q9Y3E1 203 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 A0A087WZY1 265 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 TEX51A0A1B0GUA7 166 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 A0A1W2PPL8 197 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 SMLR1H3BR10 107 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 EIF1AYO14602 144 aaKnown RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 PSMB1P20618 241 aaKnown RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 LAP3P28838 519 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 SFTPDP35247 375 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 EFNB2P52799 333 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 TOMM20Q15388 145 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 ZNF239Q16600 458 aaKnown RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 TMEM244Q5VVB8 128 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 GPAT4Q86UL3 456 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 SLC7A5P1Q8MH63 180 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 OR11G2Q8NGC1 345 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 OR1J4Q8NGS1 313 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 OR2Y1Q8NGV0 311 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 DACT3Q96B18 629 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-220ENST00000496711 SLAMF6Q96DU3 332 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 DIABLOQ9NR28 239 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 CENPMQ9NSP4 180 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 CYB5R1Q9UHQ9 305 aa11.63□□□□□ -0.55
GARNL3-220ENST00000496711 TMEM272A0A1B0GTI8 110 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 PRAF2O60831 178 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 ANXA3P12429 323 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 SDHBP21912 280 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 HTR2CP28335 458 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 DCTDP32321 178 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 FOLR3P41439 243 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 EIF1AXP47813 144 aaKnown RBP11.62□□□□□ -0.55
GARNL3-220ENST00000496711 MMP16P51512 607 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 CAMK2DQ13557 499 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 ST3GAL2Q16842 350 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 C2orf76Q3KRA6 126 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 KLHL24Q6TFL4 600 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 OR6M1Q8NGM8 313 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 DEDD2Q8WXF8 326 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 HYLS1Q96M11 299 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 OXGR1Q96P68 337 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 C1orf198Q9H425 327 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 KCNK15Q9H427 330 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 FAM206AQ9NX38 181 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 SLC39A1Q9NY26 324 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 NKIRAS2Q9NYR9 191 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 ZNF222Q9UK12 451 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 A0A0C4DFX4 3053 aa11.62□□□□□ -0.55
GARNL3-220ENST00000496711 CIB4A0PJX0 185 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 MEGF11A6BM72 1044 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 AQP7P3A6NL99 342 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 ZNF814B7Z6K7 855 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 H7C417 338 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 GP1BAP07359 652 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 SSR4P51571 173 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 SLC35A1P78382 337 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 TMEM176BQ3YBM2 270 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-220ENST00000496711 Q5BKY6 102 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 GTPBP8Q8N3Z3 284 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-220ENST00000496711 NKAIN3Q8N8D7 197 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 OR6X1Q8NH79 312 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 SLC25A28Q96A46 364 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 GON7Q9BXV9 100 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 ANGPTL4Q9BY76 406 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 MTFP1Q9UDX5 166 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 TECTAO75443 2155 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 WDR87Q6ZQQ6 2873 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 NSG1A0A0A6YYJ2 146 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms