RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 FUT5Q11128 374 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 TRAP1Q12931 704 aaKnown RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 GNA13Q14344 377 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 GANABQ14697 944 aaKnown RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 TSC22D1Q15714 1073 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 EFNB3Q15768 340 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 DECR1Q16698 335 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 TMEM44Q2T9K0 475 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 GLYR1Q49A26 553 aaPredicted RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 PAPPA-AS1Q5QFB9 102 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 DCST2Q5T1A1 773 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 NCMAPQ5T1S8 102 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 REEP3Q6NUK4 255 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 ADAM5Q6NVV9 412 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 ERICH5Q6P6B1 374 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 APOOLQ6UXV4 268 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 LRRC74BQ6ZQY2 392 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 DNM1P46Q6ZS02 220 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 LINGO2Q7L985 606 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 NET1Q7Z628 596 aaPredicted RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 OR10D3Q8NH80 312 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 SMAP2Q8WU79 429 aaPredicted RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 TMEM158Q8WZ71 300 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 FAM162AQ96A26 154 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 S100PBPQ96BU1 408 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 CCDC124Q96CT7 223 aaKnown RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 TMEM19Q96HH6 336 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 ADGRG7Q96K78 797 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 TRNT1Q96Q11 434 aaKnown RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 OR10A4Q9H209 315 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 ESRP2Q9H6T0 727 aaKnown RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 PTGES2Q9H7Z7 377 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 A4GALTQ9NPC4 353 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 P2RX2Q9UBL9 471 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 SLC7A8Q9UHI5 535 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 MRTO4Q9UKD2 239 aaKnown RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 POMPQ9Y244 141 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 WDR45Q9Y484 360 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 MAGED1Q9Y5V3 778 aaPredicted RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 CEPT1Q9Y6K0 416 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 IGLV3-32A0A0A0MS00 114 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 CFAP73A6NFT4 308 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 A8MV72 311 aaPredicted RBP5.58□□□□□ -1.52
VIM-207ENST00000495528 ACOT8O14734 319 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 PHF1O43189 567 aaPredicted RBP5.58□□□□□ -1.52
VIM-207ENST00000495528 CXCL13O43927 109 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 TPST1O60507 370 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 SERPINB7O75635 380 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 ZNF682O95780 498 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 ANGPTL1O95841 491 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 PSMB1P20618 241 aaKnown RBP5.58□□□□□ -1.52
VIM-207ENST00000495528 PCGF2P35227 344 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 CRISP3P54108 245 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 C17orf67Q0P5P2 114 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 BNIP2Q12982 314 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 MAPK14Q16539 360 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 PGGHGQ32M88 737 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 CHRFAM7AQ494W8 412 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 CYBRD1Q53TN4 286 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 C1orf146Q5VVC0 180 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 CREB3L2Q70SY1 520 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 MEPCEQ7L2J0 689 aaKnown RBP5.58□□□□□ -1.52
VIM-207ENST00000495528 SPATA24Q86W54 205 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 VRK2Q86Y07 508 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 SLC30A8Q8IWU4 369 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 SMYD1Q8NB12 490 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 OR4C3Q8NH37 302 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 OR52P1PQ8NH57 321 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 ROBO4Q8WZ75 1007 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 TPD52L3Q96J77 140 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 NSMCE2Q96MF7 247 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 ZNF607Q96SK3 696 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 SLC38A1Q9H2H9 487 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 SCPEP1Q9HB40 452 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 BCL2L10Q9HD36 194 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 GLRX2Q9NS18 164 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 CALML5Q9NZT1 146 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 ACTR3BQ9P1U1 418 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 MCTS1Q9ULC4 181 aaKnown RBP5.58□□□□□ -1.52
VIM-207ENST00000495528 ABCG2Q9UNQ0 655 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 ANGPT4Q9Y264 503 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 VDAC3Q9Y277 283 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 RNF115Q9Y4L5 304 aa5.58□□□□□ -1.52
VIM-207ENST00000495528 IGHV4-30-2A0A087WSY4 118 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 A0A0J9YW62 118 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 DPRXA6NFQ7 191 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 GTPBP1O00178 669 aaKnown RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 TNFSF11O14788 317 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ARPC2O15144 300 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ADAMDEC1O15204 470 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 MFN2O95140 757 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 UTS2O95399 124 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 SYNGR4O95473 234 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 AK1P00568 194 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 SERPINA1P01009 418 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 IFNA14P01570 189 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 CD8AP01732 235 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 OPN1SWP03999 348 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 CLEC3BP05452 202 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 HPGDP15428 266 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms