RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 IGLV1-36A0A0B4J1U3 117 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 A0A1W2PPW3 197 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 RIIAD1A6NNX1 92 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 SMAD7O15105 426 aaKnown RBP13.72□□□□□ -0.21
LIME1-209ENST00000494776 FOSL1P15407 271 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 HTR5AP47898 357 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 PPOXP50336 477 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 EFNA4P52798 201 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 TEKQ02763 1124 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 TNK1Q13470 666 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 KCNMB1Q16558 191 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 MEP1BQ16820 701 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 SHQ1Q6PI26 577 aaKnown RBP13.72□□□□□ -0.21
LIME1-209ENST00000494776 ARL9Q6T311 187 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 CLEC2AQ6UVW9 174 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 ZBTB46Q86UZ6 589 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 OR1J1Q8NGS3 322 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 OR2T4Q8NH00 348 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 OR4Q3Q8NH05 313 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 DOK1Q99704 481 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 RHNO1Q9BSD3 238 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 PLCE1Q9P212 2302 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 ITPR3Q14573 2671 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 TMEM129A0AVI4 362 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 M0R233 179 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 F12P00748 615 aaPredicted RBP13.71□□□□□ -0.21
LIME1-209ENST00000494776 TP53P04637 393 aaPredicted RBP13.71□□□□□ -0.21
LIME1-209ENST00000494776 ADRA2AP08913 450 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 INHBBP09529 407 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 COX5BP10606 129 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 FCGR1AP12314 374 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 ZNF823P16415 610 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 ZNF3P17036 446 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 FASP25445 335 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 PYCR1P32322 319 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 EVX1P49640 407 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 DSCR9P59020 149 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 DBPQ10586 325 aaPredicted RBP13.71□□□□□ -0.21
LIME1-209ENST00000494776 CCNIQ14094 377 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 SLC27A4Q6P1M0 643 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 LRP11Q86VZ4 500 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 IQCF1Q8N6M8 205 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 SLC37A3Q8NCC5 494 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 GJC3Q8NFK1 279 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 OR2AJ1Q8NGZ0 328 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 SYNPRQ8TBG9 265 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 OTULINQ96BN8 352 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 NRBF2Q96F24 287 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 SORCS2Q96PQ0 1159 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 ELOVL3Q9HB03 270 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 GPR160Q9UJ42 338 aa13.71□□□□□ -0.21
LIME1-209ENST00000494776 RER1O15258 196 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 SYNGR3O43761 229 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 ABHD16AO95870 558 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 GAAP10253 952 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 OSMP13725 252 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 GCH1P30793 250 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 GRK5P34947 590 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 ALDH3B1P43353 468 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 KLF3P57682 345 aaPredicted RBP13.7□□□□□ -0.22
LIME1-209ENST00000494776 ERVS71-1P61550 626 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 CRMP1Q14194 572 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 ATP6AP1Q15904 470 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 CARTPTQ16568 116 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 NKPD1Q17RQ9 610 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 MSMPQ1L6U9 139 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 VASH1Q7L8A9 365 aaPredicted RBP13.7□□□□□ -0.22
LIME1-209ENST00000494776 ZNF525Q8N782 197 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 SLC26A10Q8NG04 563 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 OR9Q1Q8NGQ5 310 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 OR5K1Q8NHB7 308 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 ABHD4Q8TB40 342 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 UTP4Q969X6 686 aaKnown RBP13.7□□□□□ -0.22
LIME1-209ENST00000494776 C4orf45Q96LM5 186 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 TEX12Q9BXU0 123 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 MS4A5Q9H3V2 200 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 NTN4Q9HB63 628 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 DLL4Q9NR61 685 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 REV1Q9UBZ9 1251 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 GRIP1Q9Y3R0 1128 aa13.7□□□□□ -0.22
LIME1-209ENST00000494776 G3V2T6 193 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 LY6HO94772 140 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 TFP02787 698 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 CSF3P09919 207 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 WNT5AP41221 380 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 GINS1Q14691 196 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 MOGQ16653 247 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 ALKBH6Q3KRA9 238 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 ZNF718Q3SXZ3 478 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 CCDC92Q53HC0 331 aaPredicted RBP13.69□□□□□ -0.22
LIME1-209ENST00000494776 SPATA46Q5T0L3 261 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 CORO6Q6QEF8 472 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 AMIGO2Q86SJ2 522 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 HIPK1Q86Z02 1210 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 LINC00346Q8IVM7 164 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 C1orf174Q8IYL3 243 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 ZNF101Q8IZC7 436 aa13.69□□□□□ -0.22
LIME1-209ENST00000494776 ZCCHC24Q8N2G6 241 aaKnown RBP13.69□□□□□ -0.22
LIME1-209ENST00000494776 CIARTQ8N365 385 aaPredicted RBP13.69□□□□□ -0.22
LIME1-209ENST00000494776 OR51L1Q8NGJ5 315 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms