RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 MT-ND5P03915 603 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 ACHEP22303 614 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 MPV17P39210 176 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 HTR5AP47898 357 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 PPP1CBP62140 327 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 CCL8P80075 99 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 C1orf94Q6P1W5 598 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 JAZF1Q86VZ6 243 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 DHFR2Q86XF0 187 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 IPCEF1Q8WWN9 437 aaPredicted RBP28.37■■■□□ 2.13
CBX4-203ENST00000494546 YIPF5Q969M3 257 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 TSSK2Q96PF2 358 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 SOX7Q9BT81 388 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 ELOVL3Q9HB03 270 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 KCNS2Q9ULS6 477 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 KRT36O76013 467 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 T-ENOLP0DO92 83 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 GSSP48637 474 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 ARHGDIAP52565 204 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 AQP6Q13520 282 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 PCGF3Q3KNV8 242 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 PGBD2Q6P3X8 592 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 LEG1Q6P5S2 330 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 ARL9Q6T311 187 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 KLF14Q8TD94 323 aaPredicted RBP28.36■■■□□ 2.13
CBX4-203ENST00000494546 MUC13Q9H3R2 512 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 PLEK2Q9NYT0 353 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 ASH2LQ9UBL3 628 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 CDC42EP3Q9UKI2 254 aa28.36■■■□□ 2.13
CBX4-203ENST00000494546 TCRBV5S2A0A599 114 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 TNFRSF11BO00300 401 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 GPANK1O95872 356 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 COX5BP10606 129 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 CRABP1P29762 137 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 IL2RGP31785 369 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 GPR6P46095 362 aaPredicted RBP28.35■■■□□ 2.13
CBX4-203ENST00000494546 LSM6P62312 80 aaKnown RBP28.35■■■□□ 2.13
CBX4-203ENST00000494546 MBNL2Q5VZF2 373 aaKnown RBP28.35■■■□□ 2.13
CBX4-203ENST00000494546 DNM1P34Q6PK57 102 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 VASH1Q7L8A9 365 aaPredicted RBP28.35■■■□□ 2.13
CBX4-203ENST00000494546 ZSCAN2Q7Z7L9 614 aaPredicted RBP28.35■■■□□ 2.13
CBX4-203ENST00000494546 C1orf174Q8IYL3 243 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 NMNAT3Q96T66 252 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 ZNF275Q9NSD4 429 aaPredicted RBP28.35■■■□□ 2.13
CBX4-203ENST00000494546 TMEM160Q9NX00 188 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 POLR1DQ9Y2S0 133 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 LYVE1Q9Y5Y7 322 aa28.35■■■□□ 2.13
CBX4-203ENST00000494546 CDC14BO60729 498 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 ABHD16AO95870 558 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 TGFAP01135 160 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 NOS3P29474 1203 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 MRPS11P82912 194 aaKnown RBP28.34■■■□□ 2.13
CBX4-203ENST00000494546 TSPAN31Q12999 210 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 TRIM25Q14258 630 aaKnown RBP28.34■■■□□ 2.13
CBX4-203ENST00000494546 TMEM255AQ5JRV8 349 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 LCN8Q6JVE9 175 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 OR4K13Q8NH42 304 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 HPS1Q92902 700 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 BEX2Q9BXY8 128 aa28.34■■■□□ 2.13
CBX4-203ENST00000494546 DCTN6O00399 190 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 ARPC3O15145 178 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 TPD52L2O43399 206 aaKnown RBP28.33■■■□□ 2.13
CBX4-203ENST00000494546 ICMTO60725 284 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 RENP00797 406 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 HIST1H1CP16403 213 aaKnown RBP28.33■■■□□ 2.13
CBX4-203ENST00000494546 ZNF81P51508 661 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 MS4A2Q01362 244 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 CCNIQ14094 377 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 TSTQ16762 297 aaKnown RBP28.33■■■□□ 2.13
CBX4-203ENST00000494546 ZNF620Q6ZNG0 422 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 OR9Q2Q8NGE9 314 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 SHARPINQ9H0F6 387 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 NARFLQ9H6Q4 476 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 SRA1Q9HD15 236 aaKnown RBP28.33■■■□□ 2.13
CBX4-203ENST00000494546 DECR2Q9NUI1 292 aa28.33■■■□□ 2.13
CBX4-203ENST00000494546 PRPF19Q9UMS4 504 aaKnown RBP28.33■■■□□ 2.13
CBX4-203ENST00000494546 PLSCR5A0PG75 271 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 PPIHO43447 177 aaKnown RBP28.32■■■□□ 2.12
CBX4-203ENST00000494546 IGFBP5P24593 272 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 MAGEA2P43356 314 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 HMGA2P52926 109 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 MEP1BQ16820 701 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 MAGIXQ9H6Y5 334 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 EGLN3Q9H6Z9 239 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 NKIRAS2Q9NYR9 191 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 B9D1Q9UPM9 204 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 GRIP1Q9Y3R0 1128 aa28.32■■■□□ 2.12
CBX4-203ENST00000494546 SPRY3O43610 288 aa28.31■■■□□ 2.12
CBX4-203ENST00000494546 TMEM33P57088 247 aa28.31■■■□□ 2.12
CBX4-203ENST00000494546 DBPQ10586 325 aaPredicted RBP28.31■■■□□ 2.12
CBX4-203ENST00000494546 KCNMB1Q16558 191 aa28.31■■■□□ 2.12
CBX4-203ENST00000494546 CLEC12AQ5QGZ9 265 aa28.31■■■□□ 2.12
CBX4-203ENST00000494546 OR6V1Q8N148 313 aa28.31■■■□□ 2.12
CBX4-203ENST00000494546 SLC7A6Q92536 515 aa28.31■■■□□ 2.12
CBX4-203ENST00000494546 CCDC124Q96CT7 223 aaKnown RBP28.31■■■□□ 2.12
CBX4-203ENST00000494546 BTBD10Q9BSF8 475 aa28.31■■■□□ 2.12
CBX4-203ENST00000494546 RPRD1BQ9NQG5 326 aaKnown RBP28.31■■■□□ 2.12
CBX4-203ENST00000494546 IGLV1-36A0A0B4J1U3 117 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 H3BSA7 217 aa28.3■■■□□ 2.12
CBX4-203ENST00000494546 RER1O15258 196 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms