RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 SCRN3Q0VDG4 424 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 HIST2H3PS2Q5TEC6 136 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 HIST2H3AQ71DI3 136 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 VASH1Q7L8A9 365 aaPredicted RBP20.18■□□□□ 0.82
CLIC3-203ENST00000494426 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.18■□□□□ 0.82
CLIC3-203ENST00000494426 TGIF2LYQ8IUE0 185 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 OR51L1Q8NGJ5 315 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 OR2T4Q8NH00 348 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 DNAJC9Q8WXX5 260 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 DOK1Q99704 481 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 PKP2Q99959 881 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 HCAR1Q9BXC0 346 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 KIF17Q9P2E2 1029 aa20.18■□□□□ 0.82
CLIC3-203ENST00000494426 C5orf49A4QMS7 147 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 RER1O15258 196 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 SGCEO43556 437 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 IFNGP01579 166 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 GYPBP06028 91 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 CLUP10909 449 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 PCSK6P29122 969 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 GGT2P36268 569 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 WNT5AP41221 380 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 GDI2P50395 445 aaKnown RBP20.17■□□□□ 0.82
CLIC3-203ENST00000494426 CRISP1P54107 249 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 UCP2P55851 309 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 TMEM236Q5W0B7 351 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 LYPD4Q6UWN0 246 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 ZDHHC13Q8IUH4 622 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 PARP8Q8N3A8 854 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 PTP4A1Q93096 173 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 MRPL24Q96A35 216 aaKnown RBP20.17■□□□□ 0.82
CLIC3-203ENST00000494426 RAB3IPQ96QF0 476 aaPredicted RBP20.17■□□□□ 0.82
CLIC3-203ENST00000494426 MRPL37Q9BZE1 423 aaKnown RBP20.17■□□□□ 0.82
CLIC3-203ENST00000494426 OR51B6Q9H340 312 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 SLC25A19Q9HC21 320 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 CMAHPQ9Y471 501 aa20.17■□□□□ 0.82
CLIC3-203ENST00000494426 FAM183AA6NL82 134 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 RIIAD1A6NNX1 92 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 VSTM5A8MXK1 200 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 H7C417 338 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 SYNGR3O43761 229 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 DOK2O60496 412 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 COX5BP10606 129 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 SPI1P17947 270 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 ERVS71-1P61550 626 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 KDM4DQ6B0I6 523 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 ZFP1Q6P2D0 407 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 CORO6Q6QEF8 472 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 LRP11Q86VZ4 500 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 ZNF101Q8IZC7 436 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 SVOPLQ8N434 492 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 PROKR2Q8NFJ6 384 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 MED20Q9H944 212 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 OAZ3Q9UMX2 235 aa20.16■□□□□ 0.82
CLIC3-203ENST00000494426 VPS13CQ709C8 3753 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 TVP23AA6NH52 213 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 SURF4O15260 269 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 HLA-DQA2P01906 255 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 PSKH1P11801 424 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 ZNF3P17036 446 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 SNRPD2P62316 118 aaKnown RBP20.15■□□□□ 0.82
CLIC3-203ENST00000494426 LINC01590Q5TEZ4 76 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 SLC18B1Q6NT16 456 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 LINC00346Q8IVM7 164 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 PLEK2Q9NYT0 353 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 CYB5R1Q9UHQ9 305 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 TMEFF2Q9UIK5 374 aaPredicted RBP20.15■□□□□ 0.82
CLIC3-203ENST00000494426 FZR1Q9UM11 496 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 POLR1DQ9Y2S0 133 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 PMF1-BGLAPU3KQ54 211 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 CELSR1Q9NYQ6 3014 aa20.15■□□□□ 0.82
CLIC3-203ENST00000494426 ITPR3Q14573 2671 aa20.14■□□□□ 0.82
CLIC3-203ENST00000494426 TEP1Q99973 2627 aaKnown RBP20.14■□□□□ 0.82
CLIC3-203ENST00000494426 OR6C6A6NF89 314 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 SAC3D1A6NKF1 404 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 ICMTO60725 284 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 HMGN1P05114 100 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 RAD52P43351 418 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 HTR5AP47898 357 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 RPS23P62266 143 aaKnown RBP20.14■□□□□ 0.81
CLIC3-203ENST00000494426 PTGES3Q15185 160 aaKnown RBP20.14■□□□□ 0.81
CLIC3-203ENST00000494426 ZNF511Q8NB15 262 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 GJC3Q8NFK1 279 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 OR10H5Q8NGA6 315 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 OR1F12Q8NHA8 337 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 SLC7A6Q92536 515 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 TMUB1Q9BVT8 246 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 KRT84Q9NSB2 600 aa20.14■□□□□ 0.81
CLIC3-203ENST00000494426 MYEF2Q9P2K5 600 aaKnown RBP20.14■□□□□ 0.81
CLIC3-203ENST00000494426 NDRG4Q9ULP0 352 aaKnown RBP20.14■□□□□ 0.81
CLIC3-203ENST00000494426 NGFP01138 241 aa20.13■□□□□ 0.81
CLIC3-203ENST00000494426 LCKP06239 509 aa20.13■□□□□ 0.81
CLIC3-203ENST00000494426 BMP4P12644 408 aa20.13■□□□□ 0.81
CLIC3-203ENST00000494426 EPHA2P29317 976 aa20.13■□□□□ 0.81
CLIC3-203ENST00000494426 EVX1P49640 407 aa20.13■□□□□ 0.81
CLIC3-203ENST00000494426 ESRRGP62508 458 aa20.13■□□□□ 0.81
CLIC3-203ENST00000494426 PPP2R2BQ00005 443 aa20.13■□□□□ 0.81
CLIC3-203ENST00000494426 RAB35Q15286 201 aa20.13■□□□□ 0.81
CLIC3-203ENST00000494426 RGS7BPQ6MZT1 257 aaPredicted RBP20.13■□□□□ 0.81
CLIC3-203ENST00000494426 CFAP77Q6ZQR2 320 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms