RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CORO6Q6QEF8 472 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 LYPD4Q6UWN0 246 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 OR10H5Q8NGA6 315 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 STMN2Q93045 179 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 TEX12Q9BXU0 123 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 CXorf56Q9H5V9 222 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 ZNF442Q9H7R0 627 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 CDH20Q9HBT6 801 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 PLEK2Q9NYT0 353 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 SPEF1Q9Y4P9 236 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 LHFPL6Q9Y693 200 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 C5orf49A4QMS7 147 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 ERICH4A6NGS2 130 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 ZAR1LA6NP61 321 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 PRR23D1E9PI22 279 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-208ENST00000494334 EI24O14681 340 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 SGCEO43556 437 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 SYNGR3O43761 229 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 DOK2O60496 412 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 SMPD2O60906 423 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 BAG2O95816 211 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 ALPLP05186 524 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 FAM157BP0CG42 384 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 PRR23D2P0DMB1 279 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-208ENST00000494334 COX5BP10606 129 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 ZNF823P16415 610 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 FMO3P31513 532 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 GLRXP35754 106 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 SERPINF1P36955 418 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 CDKN1AP38936 164 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 GDI2P50395 445 aaKnown RBP11.68□□□□□ -0.54
COL1A1-208ENST00000494334 HIST1H3AP68431 136 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 TESK1Q15569 626 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 SNAPC1Q16533 368 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 MSMPQ1L6U9 139 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 SWI5Q1ZZU3 235 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 HIST2H3PS2Q5TEC6 136 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 SLX4IPQ5VYV7 408 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 PLBD1Q6P4A8 553 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 HIST2H3AQ71DI3 136 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 VASH1Q7L8A9 365 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-208ENST00000494334 CPOQ8IVL8 374 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 LINC00346Q8IVM7 164 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 GJC3Q8NFK1 279 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 OTULINQ96BN8 352 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 PLEKHA8Q96JA3 519 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 CDADC1Q9BWV3 514 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 OR51V1Q9H2C8 321 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 CXXC4Q9H2H0 198 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 WDR76Q9H967 626 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 HINT3Q9NQE9 182 aaKnown RBP11.68□□□□□ -0.54
COL1A1-208ENST00000494334 ZNF701Q9NV72 531 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-208ENST00000494334 USE1Q9NZ43 259 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 CYB5R1Q9UHQ9 305 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 ENOPH1Q9UHY7 261 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 NDRG4Q9ULP0 352 aaKnown RBP11.68□□□□□ -0.54
COL1A1-208ENST00000494334 POLR1DQ9Y2S0 133 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 DSCAMO60469 2012 aa11.68□□□□□ -0.54
COL1A1-208ENST00000494334 VSTM5A8MXK1 200 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 GLCEO94923 617 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 PSKH1P11801 424 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 PAX1P15863 534 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 PAICSP22234 425 aaKnown RBP11.67□□□□□ -0.54
COL1A1-208ENST00000494334 PCSK6P29122 969 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 WNT5AP41221 380 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 RPS27P42677 84 aaKnown RBP11.67□□□□□ -0.54
COL1A1-208ENST00000494334 RAD52P43351 418 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 HTR5AP47898 357 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 ALDH3A2P51648 485 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 BLVRAP53004 296 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 UCP2P55851 309 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 ADAM8P78325 824 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 EFNB1P98172 346 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 EFNB3Q15768 340 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 C12orf73Q69YU5 71 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 SLC18B1Q6NT16 456 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 LRRC75A-AS1Q8N1F1 130 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 CBR4Q8N4T8 237 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 OR6K6Q8NGW6 343 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 SLC29A1Q99808 456 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 GABARAPL3Q9BY60 117 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 GSX2Q9BZM3 304 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 OR51B6Q9H340 312 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 RIBC2Q9H4K1 309 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 KCNG2Q9UJ96 466 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 GDF2Q9UK05 429 aaPredicted RBP11.67□□□□□ -0.54
COL1A1-208ENST00000494334 CMAHPQ9Y471 501 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 COMMD3-BMI1R4GMX3 469 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 PLCE1Q9P212 2302 aa11.67□□□□□ -0.54
COL1A1-208ENST00000494334 RTTNQ86VV8 2226 aa11.66□□□□□ -0.54
COL1A1-208ENST00000494334 TACC2O95359 2948 aa11.66□□□□□ -0.54
COL1A1-208ENST00000494334 TMEM129A0AVI4 362 aa11.66□□□□□ -0.54
COL1A1-208ENST00000494334 OR6C6A6NF89 314 aa11.66□□□□□ -0.54
COL1A1-208ENST00000494334 B9A039 149 aa11.66□□□□□ -0.54
COL1A1-208ENST00000494334 ZNF593O00488 134 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-208ENST00000494334 PRKYO43930 277 aa11.66□□□□□ -0.54
COL1A1-208ENST00000494334 PTH2RP49190 550 aa11.66□□□□□ -0.54
COL1A1-208ENST00000494334 ERVS71-1P61550 626 aa11.66□□□□□ -0.54
COL1A1-208ENST00000494334 RAB35Q15286 201 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms