RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SIX6O95475 246 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 FAM213BQ8TBF2 198 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 NTN4Q9HB63 628 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 HEYLQ9NQ87 328 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-207ENST00000494090 TGFBR1P36897 503 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 RFX2P48378 723 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 SUB1P53999 127 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL27A1-207ENST00000494090 DND1Q8IYX4 353 aaKnown RBP17.47■□□□□ 0.39
COL27A1-207ENST00000494090 FYTTD1Q96QD9 318 aaKnown RBP17.47■□□□□ 0.39
COL27A1-207ENST00000494090 MENTQ9BUN1 341 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 KIAA1551Q9HCM1 1747 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 IL2RAP01589 272 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 OMGP23515 440 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 EVX1P49640 407 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 GCNT2Q8N0V5 402 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 SPEM1Q8N4L4 309 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 RNF170Q96K19 258 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 TCEAL2Q9H3H9 227 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-207ENST00000494090 FAM166BA8MTA8 275 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 SERPINF1P36955 418 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 DGCR2P98153 550 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 FABP5Q01469 135 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 ARL16Q0P5N6 197 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 SLC10A1Q14973 349 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 TERB2Q8NHR7 220 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 STT3BQ8TCJ2 826 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 EXOSC3Q9NQT5 275 aaKnown RBP17.47■□□□□ 0.39
COL27A1-207ENST00000494090 RBP2P50120 134 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 RAC1P63000 192 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 THEM4Q5T1C6 240 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 OGFOD3Q6PK18 319 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 CPEB2Q7Z5Q1 589 aaKnown RBP17.46■□□□□ 0.39
COL27A1-207ENST00000494090 SHARPINQ9H0F6 387 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 K7EQM0 130 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 AIPO00170 330 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 PLRG1O43660 514 aaKnown RBP17.46■□□□□ 0.39
COL27A1-207ENST00000494090 F10P00742 488 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 NPY4RP50391 375 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 HCCSP53701 268 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 TPBGQ13641 420 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 BCORQ6W2J9 1755 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 TMPRSS7Q7RTY8 843 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 KANSL1Q7Z3B3 1105 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 CATSPERDQ86XM0 798 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 CA13Q8N1Q1 262 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 TBX21Q9UL17 535 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 A0A1W2PPC4 97 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 UPK1AO00322 258 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 M6PRP20645 277 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 DOC2BQ14184 412 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 GLYR1Q49A26 553 aaPredicted RBP17.46■□□□□ 0.39
COL27A1-207ENST00000494090 TIGD3Q6B0B8 471 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 KCNG2Q9UJ96 466 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 H0Y8X5 98 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 GPR85P60893 370 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 AQP6Q13520 282 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 OR1S2Q8NGQ3 325 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 MARC2Q969Z3 335 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 SEH1LQ96EE3 360 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 TAS2R4Q9NYW5 299 aa17.46■□□□□ 0.39
COL27A1-207ENST00000494090 PUS1Q9Y606 427 aaKnown RBP eCLIP17.46■□□□□ 0.39
COL27A1-207ENST00000494090 POM121BA6NF01 834 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 TGM4P49221 684 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 OR8G1Q15617 311 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 WWTR1Q9GZV5 400 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 RREB1Q92766 1687 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 URB1O60287 2271 aaKnown RBP17.45■□□□□ 0.38
COL27A1-207ENST00000494090 A0A087WZY1 265 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 GSX2Q9BZM3 304 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 IL21Q9HBE4 155 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 ANKRD10Q9NXR5 420 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 LOC107986453A0A1B0GWG9 222 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 ITGBL1O95965 494 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-207ENST00000494090 ADH4P08319 380 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 HLA-DOBP13765 273 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 GLB1P16278 677 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 C3orf49Q96BT1 292 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 DDOQ99489 341 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 ZNF346Q9UL40 294 aaKnown RBP17.45■□□□□ 0.38
COL27A1-207ENST00000494090 SSC5DA1L4H1 1573 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 IGHV3-20A0A0C4DH32 117 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 TXNL1O43396 289 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 CORO2AQ92828 525 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 PCED1AQ9H1Q7 454 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 OR51B4Q9Y5P0 310 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 GRPP07492 148 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 FAM53BQ14153 422 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 ARIH2OSQ8N7S6 290 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 OR6K3Q8NGY3 331 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 OR10J5Q8NHC4 309 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 SMIM19Q96E16 107 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 PROCRQ9UNN8 238 aa17.45■□□□□ 0.38
COL27A1-207ENST00000494090 ALX3O95076 343 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 CTSLP07711 333 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 EGR3Q06889 387 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 TFAP2EQ6VUC0 442 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 SCCPDHQ8NBX0 429 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 SLC30A7Q8NEW0 376 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 LANCL2Q9NS86 450 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 TNRC6CQ9HCJ0 1690 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms