RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PTPRUQ92729 1446 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 NALCNQ8IZF0 1738 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 PHIPQ8WWQ0 1821 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OVOS2A0A0J9YW53 1432 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GLYATL1P3A0A0U1RQE8 302 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 CDHR4A6H8M9 788 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GLTPD2A6NH11 291 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 CLDN24A6NM45 220 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM150CB9EJG8 249 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 H3BTX0 84 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 K7ERU9 68 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GYG2O15488 501 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ERI3O43414 337 aaKnown RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 HYAL3O43820 417 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 EFNA2O43921 213 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SLC16A7O60669 478 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TNFSF15O95150 251 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OXTP01178 125 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 IFNA17P01571 189 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 RLN2P04090 185 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 NGFRP08138 427 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ALDOCP09972 364 aaKnown RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SLC35G4P0C7Q5 338 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 LIMS3P0CW19 117 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 LIMS4P0CW20 117 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 IL1RNP18510 177 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TAC1P20366 129 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 IMPDH1P20839 514 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ITPKBP27987 946 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GRPRP30550 384 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OR3A4PP47883 348 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 METAP2P50579 478 aaKnown RBP eCLIP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 STC1P52823 247 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 CTSCP53634 463 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GAS1P54826 345 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 RAB25P57735 213 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF121P58317 390 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TAS2R38P59533 333 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 KLRB1Q12918 225 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OR2F1Q13607 317 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 NKPD1Q17RQ9 610 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 VMACQ2NL98 169 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM128Q5BJH2 165 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OVOS2Q6IE36 1432 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 BAIAP2L2Q6UXY1 529 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 CCDC141Q6ZP82 1450 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TMPPEQ6ZT21 453 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 CCDC190Q86UF4 302 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 LMTK2Q8IWU2 1503 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 FBXO16Q8IX29 292 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ABHD12Q8N2K0 398 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 LRRC25Q8N386 305 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 D2HGDHQ8N465 521 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GDPD1Q8N9F7 314 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GJC3Q8NFK1 279 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OR4M2Q8NGB6 313 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OR4D9Q8NGE8 314 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 OR10G9Q8NGN4 311 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 IL17DQ8TAD2 202 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SLC7A13Q8TCU3 470 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZFP90Q8TF47 636 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM170AQ8WVE7 144 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 PCNPQ8WW12 178 aaKnown RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 BADQ92934 168 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TOMM40LQ969M1 308 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TAAR8Q969N4 342 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 CCDC126Q96EE4 140 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SMARCD1Q96GM5 515 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF354BQ96LW1 612 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF778Q96MU6 729 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 GFI1Q99684 422 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 NKX3-1Q99801 234 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 C1orf50Q9BV19 199 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 FAIM2Q9BWQ8 316 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 SETD5Q9C0A6 1442 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 RBM38Q9H0Z9 239 aaKnown RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ABCG5Q9H222 651 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ZBTB20Q9HC78 741 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM74BQ9NUR3 256 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 TESQ9UGI8 421 aaKnown RBP3.72□□□□□ -1.81
BRCA1-220ENST00000492859 PILRBQ9UKJ0 227 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 MYH13Q9UKX3 1938 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 DHDHQ9UQ10 334 aa3.72□□□□□ -1.81
BRCA1-220ENST00000492859 ABCC10Q5T3U5 1492 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 CCDC18Q5T9S5 1454 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 PTPRTO14522 1441 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 MST1RQ04912 1400 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 CNTNAP1P78357 1384 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SLC22A23A1A5C7 686 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 C20orf202A1L168 122 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SIGLEC16A6NMB1 481 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 H3BMH7 237 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 H3BSA7 217 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 CLIC1O00299 241 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SLC17A3O00476 420 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 MRASO14807 208 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SYT7O43581 403 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SPRY2O43597 315 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 EIF4E2O60573 245 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms