RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 MPV17P39210 176 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 SCRN3Q0VDG4 424 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 AQP6Q13520 282 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 MEP1BQ16820 701 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 CLEC12AQ5QGZ9 265 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 ELFN2Q5R3F8 820 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 OR2T5Q6IEZ7 315 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.11■□□□□ 0.97
UPF3A-209ENST00000492270 OR2T29Q8NH02 315 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 ABHD4Q8TB40 342 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 SLC25A40Q8TBP6 338 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 LRGUKQ96M69 825 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 PLA2G12AQ9BZM1 189 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 ASH2LQ9UBL3 628 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 EIF3KQ9UBQ5 218 aaKnown RBP21.11■□□□□ 0.97
UPF3A-209ENST00000492270 CDH10Q9Y6N8 788 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 IGLV1-36A0A0B4J1U3 117 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 SGCEO43556 437 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 GIFP27352 417 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 MAGEB1P43366 347 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 HTR5AP47898 357 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 CENPAP49450 140 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 SELENOVP59797 346 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 SLC35F1Q5T1Q4 408 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 VASH1Q7L8A9 365 aaPredicted RBP21.1■□□□□ 0.97
UPF3A-209ENST00000492270 ADGRG5Q8IZF4 528 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 OR6V1Q8N148 313 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 SDR9C7Q8NEX9 313 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 OR8D4Q8NGM9 314 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 IPCEF1Q8WWN9 437 aaPredicted RBP21.1■□□□□ 0.97
UPF3A-209ENST00000492270 SLC7A6Q92536 515 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 SLC7A6OSQ96CW6 309 aaPredicted RBP21.1■□□□□ 0.97
UPF3A-209ENST00000492270 MARS2Q96GW9 593 aaKnown RBP21.1■□□□□ 0.97
UPF3A-209ENST00000492270 WACQ9BTA9 647 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 OR2J1Q9GZK6 312 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 SRA1Q9HD15 236 aaKnown RBP21.1■□□□□ 0.97
UPF3A-209ENST00000492270 RPRD1BQ9NQG5 326 aaKnown RBP21.1■□□□□ 0.97
UPF3A-209ENST00000492270 NDRG4Q9ULP0 352 aaKnown RBP21.1■□□□□ 0.97
UPF3A-209ENST00000492270 B9D1Q9UPM9 204 aa21.1■□□□□ 0.97
UPF3A-209ENST00000492270 SAMHD1Q9Y3Z3 626 aaKnown RBP21.1■□□□□ 0.97
UPF3A-209ENST00000492270 TLX2O43763 284 aaPredicted RBP21.09■□□□□ 0.97
UPF3A-209ENST00000492270 ICMTO60725 284 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 RENP00797 406 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 ZNF16P17020 682 aaPredicted RBP21.09■□□□□ 0.97
UPF3A-209ENST00000492270 NOS3P29474 1203 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 CRABP1P29762 137 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 PPP1CBP62140 327 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 LSM6P62312 80 aaKnown RBP21.09■□□□□ 0.97
UPF3A-209ENST00000492270 KCNMB1Q16558 191 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 KRTAP21-3Q3LHN1 58 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 C6orf52Q5T4I8 152 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 DNM1P34Q6PK57 102 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 LINC00471Q8N535 108 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 AQP11Q8NBQ7 271 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 C4orf45Q96LM5 186 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 REEP1Q9H902 201 aa21.09■□□□□ 0.97
UPF3A-209ENST00000492270 OR6C68A6NDL8 312 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 C17orf100A8MU93 164 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 GYG2O15488 501 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 IGHV3-13P01766 116 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 RAP2AP10114 183 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 COX5BP10606 129 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 COL8A2P25067 703 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.08■□□□□ 0.97
UPF3A-209ENST00000492270 TRAP1Q12931 704 aaKnown RBP21.08■□□□□ 0.97
UPF3A-209ENST00000492270 RIN1Q13671 783 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 CCDC92Q53HC0 331 aaPredicted RBP21.08■□□□□ 0.97
UPF3A-209ENST00000492270 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.08■□□□□ 0.974e-19■■□□□ 13.4
UPF3A-209ENST00000492270 OR52L1Q8NGH7 329 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 OR52E2Q8NGJ4 325 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 KLF14Q8TD94 323 aaPredicted RBP21.08■□□□□ 0.97
UPF3A-209ENST00000492270 SNX33Q8WV41 574 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 YIPF5Q969M3 257 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 SNX18Q96RF0 628 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 POFUT1Q9H488 388 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 HINT3Q9NQE9 182 aaKnown RBP21.08■□□□□ 0.97
UPF3A-209ENST00000492270 SLCO1C1Q9NYB5 712 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 PLEK2Q9NYT0 353 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 POLR1DQ9Y2S0 133 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 LHFPL6Q9Y693 200 aa21.08■□□□□ 0.97
UPF3A-209ENST00000492270 TANC2Q9HCD6 1990 aa21.08■□□□□ 0.96
UPF3A-209ENST00000492270 LRP5LA4QPB2 252 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 BHLHE40O14503 412 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 RER1O15258 196 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 CRLF1O75462 422 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 GCH1P30793 250 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 TRIP10Q15642 601 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 MICAQ29983 383 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 ZNF718Q3SXZ3 478 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 DNAL1Q4LDG9 190 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 PGM2L1Q6PCE3 622 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 RASSF6Q6ZTQ3 369 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 CANT1Q8WVQ1 401 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 RACGAP1Q9H0H5 632 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 JMJD1CQ15652 2540 aa21.07■□□□□ 0.96
UPF3A-209ENST00000492270 A8MV72 311 aaPredicted RBP21.06■□□□□ 0.96
UPF3A-209ENST00000492270 IDH3BO43837 385 aa21.06■□□□□ 0.96
UPF3A-209ENST00000492270 SOX14O95416 240 aa21.06■□□□□ 0.96
UPF3A-209ENST00000492270 ABHD16AO95870 558 aa21.06■□□□□ 0.96
UPF3A-209ENST00000492270 ZNF23P17027 643 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms