RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 SLC6A9P48067 706 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 GDI2P50395 445 aaKnown RBP12.18□□□□□ -0.46
SSR4-212ENST00000491833 GZMMP51124 257 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 PCBP3P57721 371 aaKnown RBP12.18□□□□□ -0.46
SSR4-212ENST00000491833 BTG1P62324 171 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 TNFAIP6P98066 277 aaPredicted RBP12.18□□□□□ -0.46
SSR4-212ENST00000491833 HIST3H3Q16695 136 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 ESCO2Q56NI9 601 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 C16orf87Q6PH81 154 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 TTC33Q6PID6 262 aaPredicted RBP12.18□□□□□ -0.46
SSR4-212ENST00000491833 LINC00114Q6XXX2 140 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 RFPL4BQ6ZWI9 263 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 HDDC2Q7Z4H3 204 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 VANGL1Q8TAA9 524 aaPredicted RBP12.18□□□□□ -0.46
SSR4-212ENST00000491833 ABHD4Q8TB40 342 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 WFDC12Q8WWY7 111 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 TAMM41Q96BW9 452 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 CCDC124Q96CT7 223 aaKnown RBP12.18□□□□□ -0.46
SSR4-212ENST00000491833 POM121L2Q96KW2 1035 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 LRGUKQ96M69 825 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 NSMCE2Q96MF7 247 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 MCHR1Q99705 422 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 WFDC6Q9BQY6 131 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 TRIM15Q9C019 465 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 MMP27Q9H306 513 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 EGFL7Q9UHF1 273 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 ZNF229Q9UJW7 825 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 SNX13Q9Y5W8 968 aa12.18□□□□□ -0.46
SSR4-212ENST00000491833 IGHV3OR16-10A0A075B7F0 116 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 TRAV40A0A0B4J280 105 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 CENPBD1B2RD01 187 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 F5H0A9 414 aaPredicted RBP12.17□□□□□ -0.46
SSR4-212ENST00000491833 M0QZ24 198 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 M0R3H8 397 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 KPNA4O00629 521 aaPredicted RBP12.17□□□□□ -0.46
SSR4-212ENST00000491833 HIST1H2ABP04908 130 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 IGHV4-38-2P0DP08 117 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 HSD17B1P14061 328 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 NCK1P16333 377 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 ZNF32P17041 273 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 IFNA8P32881 189 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 PPP1CBP62140 327 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 MRPS34P82930 218 aaKnown RBP12.17□□□□□ -0.46
SSR4-212ENST00000491833 HNRNPA0Q13151 305 aaKnown RBP12.17□□□□□ -0.46
SSR4-212ENST00000491833 CYBRD1Q53TN4 286 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 SPRNQ5BIV9 151 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 ZNF362Q5T0B9 420 aaPredicted RBP12.17□□□□□ -0.46
SSR4-212ENST00000491833 C10orf128Q5T292 105 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 BRICD5Q6PL45 260 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 CCDC80Q76M96 950 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 HIST3H2AQ7L7L0 130 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 FAM156AQ8NDB6 213 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 HIST1H2ACQ93077 130 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 THTPAQ9BU02 230 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 C1orf21Q9H246 121 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 MUC13Q9H3R2 512 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 SIAEQ9HAT2 523 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 MSL2Q9HCI7 577 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 IL20RAQ9UHF4 553 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 SAMD4AQ9UPU9 718 aaKnown RBP12.17□□□□□ -0.46
SSR4-212ENST00000491833 LRCH1Q9Y2L9 728 aa12.17□□□□□ -0.46
SSR4-212ENST00000491833 LOC100509620A0A075B734 347 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 A0A1W2PRG6 482 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 CPSF4LA6NMK7 179 aaKnown RBP12.16□□□□□ -0.46
SSR4-212ENST00000491833 TIMM8AO60220 97 aaPredicted RBP12.16□□□□□ -0.46
SSR4-212ENST00000491833 PLATP00750 562 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 SERPINA1P01009 418 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 ASAH2BP0C7U1 165 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 PPIAL4GP0DN37 164 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 TNFRSF1AP19438 455 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 CD247P20963 164 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 TNFSF4P23510 183 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 KDELR2P33947 212 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 DAP3P51398 398 aaKnown RBP12.16□□□□□ -0.46
SSR4-212ENST00000491833 BNIP1Q12981 228 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 MTX3Q5HYI7 312 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 ENTPD8Q5MY95 495 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 GLYATQ6IB77 296 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 BTNL3Q6UXE8 466 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 FKBP9P1Q75LS8 142 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 ZER1Q7Z7L7 766 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 JAZF1Q86VZ6 243 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 MUC20Q8N307 709 aaPredicted RBP12.16□□□□□ -0.46
SSR4-212ENST00000491833 ZNF283Q8N7M2 679 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 OR4F5Q8NH21 305 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 AKR7LQ8NHP1 331 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 SEPHS2Q99611 448 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 ARHGDIGQ99819 225 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 PKP2Q99959 881 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 BTBD10Q9BSF8 475 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 MRPL13Q9BYD1 178 aaKnown RBP12.16□□□□□ -0.46
SSR4-212ENST00000491833 BEX1Q9HBH7 125 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 PDP1Q9P0J1 537 aaPredicted RBP12.16□□□□□ -0.46
SSR4-212ENST00000491833 GMPR2Q9P2T1 348 aaKnown RBP12.16□□□□□ -0.46
SSR4-212ENST00000491833 V9GYQ6 96 aa12.16□□□□□ -0.46
SSR4-212ENST00000491833 MDFIC2A0A1B0GVS7 189 aa12.15□□□□□ -0.46
SSR4-212ENST00000491833 BLOC1S5-TXNDC5H3BN57 136 aa12.15□□□□□ -0.46
SSR4-212ENST00000491833 TIMM23O14925 209 aa12.15□□□□□ -0.46
SSR4-212ENST00000491833 ARPC2O15144 300 aa12.15□□□□□ -0.46
SSR4-212ENST00000491833 HOXA3O43365 443 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms