RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 PLEK2Q9NYT0 353 aa14.04□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 NDRG4Q9ULP0 352 aaKnown RBP14.04□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 PMF1-BGLAPU3KQ54 211 aa14.04□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 AKAP9Q99996 3911 aa14.04□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OTOGQ6ZRI0 2925 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 LOC100509620A0A075B734 347 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 H3BNX3 289 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 H7C417 338 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 FAM157BP0CG42 384 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 SPI1P17947 270 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 PCSK6P29122 969 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 HTR5AP47898 357 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 CRISP1P54107 249 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 ADAM8P78325 824 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 PRSS57Q6UWY2 283 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 VASH1Q7L8A9 365 aaPredicted RBP14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 MRPL24Q96A35 216 aaKnown RBP14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 PKP2Q99959 881 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 TEX12Q9BXU0 123 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 BCL2L14Q9BZR8 327 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OR51B6Q9H340 312 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 PLK3Q9H4B4 646 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 SLC25A19Q9HC21 320 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 OAZ3Q9UMX2 235 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 LHFPL6Q9Y693 200 aa14.03□□□□□ -0.16
MSH5-SAPCD1-206ENST00000491552 SAC3D1A6NKF1 404 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RER1O15258 196 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SURF4O15260 269 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 HMGN1P05114 100 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GYPBP06028 91 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PAICSP22234 425 aaKnown RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 WNT5AP41221 380 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RAD52P43351 418 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 UCP2P55851 309 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ESRRGP62508 458 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RAB35Q15286 201 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MSMPQ1L6U9 139 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CCDC92Q53HC0 331 aaPredicted RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 KDM4DQ6B0I6 523 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RGS7BPQ6MZT1 257 aaPredicted RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TGIF2LYQ8IUE0 185 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ICA1LQ8NDH6 482 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 WFDC11Q8NEX6 87 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GJC3Q8NFK1 279 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OR51L1Q8NGJ5 315 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZNRF4Q8WWF5 429 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CDADC1Q9BWV3 514 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MRPL37Q9BZE1 423 aaKnown RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 BARX1Q9HBU1 254 aaPredicted RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MRPL22Q9NWU5 206 aaKnown RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 EIF3KQ9UBQ5 218 aaKnown RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ATPIF1Q9UII2 106 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 KCNG2Q9UJ96 466 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GDF2Q9UK05 429 aaPredicted RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 FBXO9Q9UK97 447 aaPredicted RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MYO9AB2RTY4 2548 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CCDC168Q8NDH2 2452 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CREBBPQ92793 2442 aa14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PRRC2AP48634 2157 aaKnown RBP14.02□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TMEM129A0AVI4 362 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OR6C6A6NF89 314 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TVP23AA6NH52 213 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 FAM183AA6NL82 134 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SYNGR3O43761 229 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MITFO75030 526 aaPredicted RBP14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 NDUFS7O75251 213 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 IGHV4-39P01824 125 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 LCKP06239 509 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CLUP10909 449 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZNF823P16415 610 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 IGFBP5P24593 272 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 FMO3P31513 532 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 EVX1P49640 407 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PPOXP50336 477 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 HIST1H3AP68431 136 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GABPB1Q06547 395 aaPredicted RBP14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 HIST2H3PS2Q5TEC6 136 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TMEM236Q5W0B7 351 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SLC18B1Q6NT16 456 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CORO6Q6QEF8 472 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 UNQ6126/PRO20091Q6UXV3 157 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 HIST2H3AQ71DI3 136 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 LINC00346Q8IVM7 164 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OR6K6Q8NGW6 343 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OR2AJ1Q8NGZ0 328 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OR1F12Q8NHA8 337 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OTULINQ96BN8 352 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PLEKHA8Q96JA3 519 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 HCAR1Q9BXC0 346 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 HDHD2Q9H0R4 259 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MED20Q9H944 212 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PLCE1Q9P212 2302 aa14.01□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PRR23D1E9PI22 279 aaPredicted RBP14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ABHD16AO95870 558 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PRR23D2P0DMB1 279 aaPredicted RBP14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GGT2P36268 569 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 BLVRAP53004 296 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ERVS71-1P61550 626 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PTGES3Q15185 160 aaKnown RBP14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ELFN2Q5R3F8 820 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms