RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TIMM8AO60220 97 aaPredicted RBP6.85□□□□□ -1.31
USP39-216ENST00000490193 CLPXO76031 633 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 TGDSO95455 350 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 SLC2A10O95528 541 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 IGF2P01344 180 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 CRYBA1P05813 215 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 CST2P09228 141 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 NR2C1P13056 603 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 SELEP16581 610 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 GSTM3P21266 225 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 KITLGP21583 273 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 CDAP32320 146 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 ARHGDIAP52565 204 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 KRTAP10-3P60369 221 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 VSNL1P62760 191 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 RPL18Q07020 188 aaKnown RBP6.85□□□□□ -1.31
USP39-216ENST00000490193 PDCD1Q15116 288 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 DUSP7Q16829 419 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 KRT71Q3SY84 523 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 SLC25A47Q6Q0C1 308 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 ARL9Q6T311 187 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 Q6YL49 198 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 Q6ZR03 302 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 FOXL2NBQ6ZUU3 175 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 MAVSQ7Z434 540 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 SYT9Q86SS6 491 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 TSPYL5Q86VY4 417 aaPredicted RBP6.85□□□□□ -1.31
USP39-216ENST00000490193 JAZF1Q86VZ6 243 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 ALDH16A1Q8IZ83 802 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 MREGQ8N565 214 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 GPR32P1Q8NGA4 272 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 LIPHQ8WWY8 451 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 C4orf45Q96LM5 186 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 OR52B2Q96RD2 323 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 OR2H1Q9GZK4 316 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 IKZF5Q9H5V7 419 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 NANOGQ9H9S0 305 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 MEPEQ9NQ76 525 aaPredicted RBP6.85□□□□□ -1.31
USP39-216ENST00000490193 TBCCD1Q9NVR7 557 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 VAPAQ9P0L0 249 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 SLAMF8Q9P0V8 285 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.85□□□□□ -1.31
USP39-216ENST00000490193 SLC7A7Q9UM01 511 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 CORO2BQ9UQ03 480 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 PPP1R3CQ9UQK1 317 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 ANGPT4Q9Y264 503 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 SLC22A31A6NKX4 558 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 CPSF4LA6NMK7 179 aaKnown RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 BLOC1S5-TXNDC5H3BN57 136 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 KPNA4O00629 521 aaPredicted RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 ERLIN1O75477 346 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 MT-ND1P03886 318 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 F13BP05160 661 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 VIMP08670 466 aaKnown RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 COX5BP10606 129 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 KITP10721 976 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 UMPSP11172 480 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 RPS2P15880 293 aaKnown RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 AQP1P29972 269 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 RBMXP38159 391 aaKnown RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 PROK1P58294 105 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 PCBD1P61457 104 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 GNB2P62879 340 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 ERVK-25P63136 954 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 FMODQ06828 376 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 HLXQ14774 488 aaPredicted RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 TAF11Q15544 211 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 TAF9Q16594 264 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 ZNF181Q2M3W8 571 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 PAGE3Q5JUK9 113 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 FIP1L1Q6UN15 594 aaKnown RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 KLBQ86Z14 1044 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 FUNDC1Q8IVP5 155 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 FITM2Q8N6M3 262 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 SMYD1Q8NB12 490 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 OR2Z1Q8NG97 314 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 OR4D11Q8NGI4 311 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 OR10S1Q8NGN2 331 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 FNDC8Q8TC99 324 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 C10orf82Q8WW14 230 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 ITLN1Q8WWA0 313 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 HDAC2Q92769 488 aaKnown RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 UBE2FQ969M7 185 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 NEIL1Q96FI4 390 aaPredicted RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 PLEKHA8Q96JA3 519 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 FAM71F1Q96KD3 344 aaPredicted RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 OR2V2Q96R30 315 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 PRSS27Q9BQR3 290 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 WACQ9BTA9 647 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 CHIAQ9BZP6 476 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 TMEM165Q9HC07 324 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 GCM1Q9NP62 436 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 INIPQ9NRY2 104 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 MIOXQ9UGB7 285 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 NDRG4Q9ULP0 352 aaKnown RBP6.84□□□□□ -1.31
USP39-216ENST00000490193 TIMM10BQ9Y5J6 103 aa6.84□□□□□ -1.31
USP39-216ENST00000490193 EVPLLA8MZ36 301 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 TNFRSF13BO14836 293 aaPredicted RBP6.83□□□□□ -1.32
USP39-216ENST00000490193 OR7A10O76100 309 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 ABHD16AO95870 558 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms