RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 KLF3P57682 345 aaPredicted RBP11.51□□□□□ -0.57
CCL28-202ENST00000489442 LSM6P62312 80 aaKnown RBP11.51□□□□□ -0.57
CCL28-202ENST00000489442 CBX1P83916 185 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 GLO1Q04760 184 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCL28-202ENST00000489442 AQP6Q13520 282 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 NKPD1Q17RQ9 610 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 LRP11Q86VZ4 500 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 MAPK1IP1LQ8NDC0 245 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 SDR9C7Q8NEX9 313 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 OR10H5Q8NGA6 315 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 NEU4Q8WWR8 484 aaPredicted RBP11.51□□□□□ -0.57
CCL28-202ENST00000489442 SNX18Q96RF0 628 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 TSSK6Q9BXA6 273 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 DGCR6LQ9BY27 220 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 ELOVL3Q9HB03 270 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 PLEK2Q9NYT0 353 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 PDP1Q9P0J1 537 aaPredicted RBP11.51□□□□□ -0.57
CCL28-202ENST00000489442 ASH2LQ9UBL3 628 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 B9D1Q9UPM9 204 aa11.51□□□□□ -0.57
CCL28-202ENST00000489442 SONP18583 2426 aaKnown RBP11.5□□□□□ -0.57
CCL28-202ENST00000489442 IGHV4-30-2A0A087WSY4 118 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 FKBP6O75344 327 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 SOX14O95416 240 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 TP53P04637 393 aaPredicted RBP11.5□□□□□ -0.57
CCL28-202ENST00000489442 GCH1P30793 250 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 ALDH3B1P43353 468 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 HTR5AP47898 357 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 ERVS71-1P61550 626 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 COX10Q12887 443 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 MOGQ16653 247 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 MSMPQ1L6U9 139 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 ZNF718Q3SXZ3 478 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 SLC36A3Q495N2 470 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 OTPQ5XKR4 325 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 DNM1P46Q6ZS02 220 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 OR6V1Q8N148 313 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 SNX33Q8WV41 574 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 FEVQ99581 238 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 PIMREGQ9BSJ6 248 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 CDADC1Q9BWV3 514 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 PLA2G12AQ9BZM1 189 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 MMADHCQ9H3L0 296 aaPredicted RBP11.5□□□□□ -0.57
CCL28-202ENST00000489442 TPK1Q9H3S4 243 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 ZNF556Q9HAH1 456 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 MYOZ1Q9NP98 299 aaPredicted RBP11.5□□□□□ -0.57
CCL28-202ENST00000489442 SLCO1C1Q9NYB5 712 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 TAAR3PQ9P1P4 343 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 BAIAP2Q9UQB8 552 aa11.5□□□□□ -0.57
CCL28-202ENST00000489442 IGLV1-36A0A0B4J1U3 117 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 TCRBV3S1A0A5B6 114 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 OR6C68A6NDL8 312 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 H3BN98 237 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 DCTN6O00399 190 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 BHLHE40O14503 412 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 ABHD16AO95870 558 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 GPANK1O95872 356 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 CLPTM1O96005 669 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 MT-ND5P03915 603 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 HEXAP06865 529 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 IGFBP1P08833 259 aaPredicted RBP11.49□□□□□ -0.57
CCL28-202ENST00000489442 COX5BP10606 129 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 DAOP14920 347 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 ZNF250P15622 560 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 SLC25A16P16260 332 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 MAD2L1BPQ15013 274 aaPredicted RBP11.49□□□□□ -0.57
CCL28-202ENST00000489442 KCNMB1Q16558 191 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 ALKBH6Q3KRA9 238 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 SPATA46Q5T0L3 261 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 C1orf146Q5VVC0 180 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 C1orf174Q8IYL3 243 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 ZNF101Q8IZC7 436 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 CYB561A3Q8NBI2 242 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 NPEPL1Q8NDH3 523 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 PROKR2Q8NFJ6 384 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 GJC3Q8NFK1 279 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 OR2T33Q8NG76 320 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 OR8D4Q8NGM9 314 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 OR2AJ1Q8NGZ0 328 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 ABHD4Q8TB40 342 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 TEX47Q8TBZ9 253 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 C10orf105Q8TEF2 133 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 C4orf45Q96LM5 186 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 NIPSNAP1Q9BPW8 284 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 RACGAP1Q9H0H5 632 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 FN3KQ9H479 309 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 ARMC1Q9NVT9 282 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 MYEF2Q9P2K5 600 aaKnown RBP11.49□□□□□ -0.57
CCL28-202ENST00000489442 DNAJB9Q9UBS3 223 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 GRIP1Q9Y3R0 1128 aa11.49□□□□□ -0.57
CCL28-202ENST00000489442 YLPM1P49750 1951 aaKnown RBP11.48□□□□□ -0.57
CCL28-202ENST00000489442 LOC390937A0A1W2PQ73 354 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 NDUFS8O00217 210 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 IFNGP01579 166 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 NAT2P11245 290 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 ZNF823P16415 610 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 POU1F1P28069 291 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 WNT5AP41221 380 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 RIPPLY3P57055 190 aa11.48□□□□□ -0.57
CCL28-202ENST00000489442 PPP1CBP62140 327 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms