RNA–Protein interactions for RNA: ENST00000489390.1

SHOC2-205, Transcript of SHOC2, leucine rich repeat scaffold protein, human

TSL 5

Gene SHOC2, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHOC2-205	ENST00000489390	CH25H	O95992	272 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	IL6	P05231	212 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	BMP2	P12643	396 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	ACADS	P16219	412 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	RGN	Q15493	299 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	SGCA	Q16586	387 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	METTL11B	Q5VVY1	283 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	SLC35E4	Q6ICL7	350 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	C11orf88	Q6PI97	169 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	LYPD2	Q6UXB3	125 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	MNS1	Q8NEH6	495 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	LHX4	Q969G2	390 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	VPS33A	Q96AX1	596 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	HAVCR1	Q96D42	359 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	CMBL	Q96DG6	245 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	MEGF10	Q96KG7	1140 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	SPATA5L1	Q9BVQ7	753 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	SIRPD	Q9H106	197 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	POFUT1	Q9H488	388 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	ZNF229	Q9UJW7	825 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	NDRG4	Q9ULP0	352 aa	Known RBP	11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390	TIMM10B	Q9Y5J6	103 aa		11.74	□□□□□ -0.53
SHOC2-205	ENST00000489390		A0A1W2PRG6	482 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	MCIDAS	D6RGH6	385 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	RNASEK-C17orf49	H0YIS7	233 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	SLC2A10	O95528	541 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	HIST1H2AB	P04908	130 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	ASAH2B	P0C7U1	165 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	GABRA5	P31644	462 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	PSMB10	P40306	273 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	SRP9	P49458	86 aa	Known RBP	11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	COX10	Q12887	443 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	FADD	Q13158	208 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	GTDC1	Q4AE62	458 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	RUNDC3A	Q59EK9	446 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	HHAT	Q5VTY9	493 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	FOXB2	Q5VYV0	432 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	HIST3H2A	Q7L7L0	130 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	NUDCD3	Q8IVD9	361 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	PNLDC1	Q8NA58	520 aa	Known RBP	11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	ATG16L2	Q8NAA4	619 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	OR4S1	Q8NGB4	309 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	ASB10	Q8WXI3	467 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	HIST1H2AC	Q93077	130 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	EVA1A	Q9H8M9	152 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	ZNRD1	Q9P1U0	126 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	FAM96B	Q9Y3D0	163 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	RAP2C	Q9Y3L5	183 aa		11.73	□□□□□ -0.53
SHOC2-205	ENST00000489390	GMNC	A6NCL1	334 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	CHP2	O43745	196 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	SPAG7	O75391	227 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	CST2	P09228	141 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	RPL14	P50914	215 aa	Known RBP	11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	EFNB2	P52799	333 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	PCBD1	P61457	104 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	GUCY1A3	Q02108	690 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	FAM201A	Q5SY85	155 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	ZNF613	Q6PF04	617 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	MOGAT3	Q86VF5	341 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	KRT73	Q86Y46	540 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	C11orf44	Q8N8P7	122 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	SPERT	Q8NA61	448 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	NMD3	Q96D46	503 aa	Known RBP	11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	COG8	Q96MW5	612 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	TECTB	Q96PL2	329 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	TOR3A	Q9H497	397 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	RAD21L1	Q9H4I0	556 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	MEAF6	Q9HAF1	191 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	STX18	Q9P2W9	335 aa	Known RBP	11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	CAB39	Q9Y376	341 aa	Predicted RBP	11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	BIRC6	Q9NR09	4857 aa		11.72	□□□□□ -0.53
SHOC2-205	ENST00000489390	DNAH9	Q9NYC9	4486 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	IGKV1D-43	A0A0B4J1Z2	117 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	PRORSD1P	A6NEY8	169 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	ANKRD61	A6NGH8	418 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390		K7EIL1	84 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	FMO6P	O60774	539 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	FBP1	P09467	338 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	COX5B	P10606	129 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	NR2C1	P13056	603 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	SLC6A2	P23975	617 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	LAP3	P28838	519 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	DAP3	P51398	398 aa	Known RBP	11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	UGT2B15	P54855	530 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	ABCE1	P61221	599 aa	Known RBP	11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	TTC33	Q6PID6	262 aa	Predicted RBP	11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	NANOGNB	Q7Z5D8	188 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	KIRREL3	Q8IZU9	778 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	OR10AD1	Q8NGE0	317 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	OR13G1	Q8NGZ3	307 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	PTP4A1	Q93096	173 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	ITPKC	Q96DU7	683 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	ITCH	Q96J02	903 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	WFDC6	Q9BQY6	131 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	RMND5A	Q9H871	391 aa		11.71	□□□□□ -0.53
SHOC2-205	ENST00000489390	SLC13A4	Q9UKG4	626 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms