RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 MRPL39Q9NYK5 338 aaKnown RBP7.53□□□□□ -1.2
SSBP1-212ENST00000489378 FAM96BQ9Y3D0 163 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 HERC2O95714 4834 aa7.53□□□□□ -1.2
SSBP1-212ENST00000489378 A0A1W2PPM1 405 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 C11orf98E9PRG8 122 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 FBXO24O75426 580 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 OPN1SWP03999 348 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 PGA4P0DJD7 388 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 PGA3P0DJD8 388 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 HTR2AP28223 471 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 RPL4P36578 427 aaKnown RBP7.52□□□□□ -1.2
SSBP1-212ENST00000489378 KIR2DS4P43632 304 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 ERFP50548 548 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 MELKQ14680 651 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 CASP8Q14790 479 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 DMRTC1Q5HYR2 192 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 METTL11BQ5VVY1 283 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 C11orf88Q6PI97 169 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 UNQ6126/PRO20091Q6UXV3 157 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 SLC35D2Q76EJ3 337 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 ZER1Q7Z7L7 766 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 C19orf18Q8NEA5 215 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 FBLIM1Q8WUP2 373 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 ZNF566Q969W8 418 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 TEX37Q96LM6 180 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 TECTBQ96PL2 329 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 SPATA9Q9BWV2 254 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 C12orf10Q9HB07 376 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 CCNB1IP1Q9NPC3 277 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 MAN2C1Q9NTJ4 1040 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 RPS6KB2Q9UBS0 482 aa7.52□□□□□ -1.2
SSBP1-212ENST00000489378 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 IFNL4K9M1U5 179 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 SURF4O15260 269 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 LIPFP07098 398 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 FBP1P09467 338 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 HOXD3P31249 432 aaPredicted RBP7.52□□□□□ -1.21
SSBP1-212ENST00000489378 CDAP32320 146 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 PSMB10P40306 273 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 PMELP40967 661 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 CDKN2CP42773 168 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 CRATP43155 626 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 ANXA11P50995 505 aaKnown RBP7.52□□□□□ -1.21
SSBP1-212ENST00000489378 ARF6P62330 175 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 HOXA4Q00056 320 aaPredicted RBP7.52□□□□□ -1.21
SSBP1-212ENST00000489378 PSG4Q00888 419 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 PRB3Q04118 309 aaPredicted RBP7.52□□□□□ -1.21
SSBP1-212ENST00000489378 TAF11Q15544 211 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 KLHL22Q53GT1 634 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 ANXA8L1Q5VT79 327 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 DCDC5Q6ZRR9 648 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 MOGAT3Q86VF5 341 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 CALHM3Q86XJ0 350 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 NDUFA11Q86Y39 141 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 C10orf53Q8N6V4 93 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 CCDC63Q8NA47 563 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 OR6S1Q8NH40 331 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 MCHR2Q969V1 340 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 TUBGCP3Q96CW5 907 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 SLC25A44Q96H78 314 aaPredicted RBP7.52□□□□□ -1.21
SSBP1-212ENST00000489378 ZNF347Q96SE7 839 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 ZNF607Q96SK3 696 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 CITED2Q99967 270 aaPredicted RBP7.52□□□□□ -1.21
SSBP1-212ENST00000489378 CTSZQ9UBR2 303 aa7.52□□□□□ -1.21
SSBP1-212ENST00000489378 RYR1P21817 5038 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 CCDC154A6NI56 674 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 FSTL3O95633 263 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 BCHEP06276 602 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 NHLRC4P0CG21 123 aaPredicted RBP7.51□□□□□ -1.21
SSBP1-212ENST00000489378 ADORA3P0DMS8 318 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 KITLGP21583 273 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 EMX2Q04743 252 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 PCLAFQ15004 111 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 CCDC153Q494R4 210 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 CCDC92Q53HC0 331 aaPredicted RBP7.51□□□□□ -1.21
SSBP1-212ENST00000489378 ALG10BQ5I7T1 473 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 SPANXN4Q5MJ08 99 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 CD276Q5ZPR3 534 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 RNF144BQ7Z419 303 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 COMTD1Q86VU5 262 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 SPERTQ8NA61 448 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 ATG16L2Q8NAA4 619 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 OR10AD1Q8NGE0 317 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 OR4C13Q8NGP0 309 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 OR5R1Q8NH85 324 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 OR2T6Q8NHC8 308 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 MUC7Q8TAX7 377 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 SLC38A5Q8WUX1 472 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 CMBLQ96DG6 245 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 C4orf45Q96LM5 186 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 CCDC115Q96NT0 180 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 WNT5BQ9H1J7 359 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 CENPHQ9H3R5 247 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 SMURF1Q9HCE7 757 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 MKS1Q9NXB0 559 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 TBK1Q9UHD2 729 aa7.51□□□□□ -1.21
SSBP1-212ENST00000489378 A0A1W2PRD5 423 aa7.5□□□□□ -1.21
SSBP1-212ENST00000489378 A0A1W2PRF3 423 aa7.5□□□□□ -1.21
SSBP1-212ENST00000489378 A0A1W2PRM7 423 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms