RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PGBD2Q6P3X8 592 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 ABHD4Q8TB40 342 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 SNX33Q8WV41 574 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 IPCEF1Q8WWN9 437 aaPredicted RBP21.33■■□□□ 1.01
HMGN1-217ENST00000489072 SAMD8Q96LT4 415 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 OR2J1Q9GZK6 312 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 LYVE1Q9Y5Y7 322 aa21.33■■□□□ 1.01
HMGN1-217ENST00000489072 DOK2O60496 412 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 LMX1BO60663 402 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 GPANK1O95872 356 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 COX5BP10606 129 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 ACHEP22303 614 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 CALB2P22676 271 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 SLC6A6P31641 620 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 MAGEA2P43356 314 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 PPP1CBP62140 327 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 CCL8P80075 99 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 MS4A2Q01362 244 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 SCRN3Q0VDG4 424 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 FAM166AQ6J272 317 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 TMEM154Q6P9G4 183 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 VASH1Q7L8A9 365 aaPredicted RBP21.32■■□□□ 1
HMGN1-217ENST00000489072 ARHGAP24Q8N264 748 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 KLF14Q8TD94 323 aaPredicted RBP21.32■■□□□ 1
HMGN1-217ENST00000489072 C4orf45Q96LM5 186 aa21.32■■□□□ 1
HMGN1-217ENST00000489072 ZNF275Q9NSD4 429 aaPredicted RBP21.32■■□□□ 1
HMGN1-217ENST00000489072 NDRG4Q9ULP0 352 aaKnown RBP21.32■■□□□ 1
HMGN1-217ENST00000489072 ARPC3O15145 178 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 SGCEO43556 437 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 RP2O75695 350 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 IGFBP5P24593 272 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 GCH1P30793 250 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 IFNGR2P38484 337 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 HTR5AP47898 357 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 HMGA2P52926 109 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 LSM6P62312 80 aaKnown RBP21.31■■□□□ 1
HMGN1-217ENST00000489072 MRPS11P82912 194 aaKnown RBP21.31■■□□□ 1
HMGN1-217ENST00000489072 TSPAN31Q12999 210 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 AQP6Q13520 282 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 MTX3Q5HYI7 312 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 MBNL2Q5VZF2 373 aaKnown RBP21.31■■□□□ 1
HMGN1-217ENST00000489072 LCN8Q6JVE9 175 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 ZNF620Q6ZNG0 422 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 GNPDA2Q8TDQ7 276 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 IFT27Q9BW83 186 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 NKIRAS2Q9NYR9 191 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 ASH2LQ9UBL3 628 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 CDC42EP3Q9UKI2 254 aa21.31■■□□□ 1
HMGN1-217ENST00000489072 IGLV1-36A0A0B4J1U3 117 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 GAAP10253 952 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 HIST1H1CP16403 213 aaKnown RBP21.3■■□□□ 1
HMGN1-217ENST00000489072 GPR6P46095 362 aaPredicted RBP21.3■■□□□ 1
HMGN1-217ENST00000489072 MMP15P51511 669 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 TRIM25Q14258 630 aaKnown RBP21.3■■□□□ 1
HMGN1-217ENST00000489072 KCNMB1Q16558 191 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 MOGQ16653 247 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 PCGF3Q3KNV8 242 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 LEG1Q6P5S2 330 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 UNQ6126/PRO20091Q6UXV3 157 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 OR9Q2Q8NGE9 314 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 OR4C15Q8NGM1 316 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 SLC7A6Q92536 515 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 HPS1Q92902 700 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 NMNAT3Q96T66 252 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 BTBD10Q9BSF8 475 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 MUC13Q9H3R2 512 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 POFUT1Q9H488 388 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 ELOVL3Q9HB03 270 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 FAM53CQ9NYF3 392 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 KCNS2Q9ULS6 477 aa21.3■■□□□ 1
HMGN1-217ENST00000489072 TNFRSF11BO00300 401 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 KRT36O76013 467 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 TGFAP01135 160 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 CCNIQ14094 377 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 MEP1BQ16820 701 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 CCDC92Q53HC0 331 aaPredicted RBP21.29■■□□□ 1
HMGN1-217ENST00000489072 JAZF1Q86VZ6 243 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 DHFR2Q86XF0 187 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 C1orf174Q8IYL3 243 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 OR6V1Q8N148 313 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 OR4K13Q8NH42 304 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 MDFIQ99750 246 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 EGLN3Q9H6Z9 239 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 PLEK2Q9NYT0 353 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 B9D1Q9UPM9 204 aa21.29■■□□□ 1
HMGN1-217ENST00000489072 OR6C6A6NF89 314 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 WNT9BO14905 357 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 CDC14BO60729 498 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 ABHD16AO95870 558 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 CRABP1P29762 137 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 ZNF81P51508 661 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 TMEM33P57088 247 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 PPP1R8Q12972 351 aaKnown RBP21.28■■□□□ 1
HMGN1-217ENST00000489072 TSTQ16762 297 aaKnown RBP21.28■■□□□ 1
HMGN1-217ENST00000489072 ZNF770Q6IQ21 691 aaPredicted RBP21.28■■□□□ 1
HMGN1-217ENST00000489072 CLPTM1LQ96KA5 538 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 TRIM15Q9C019 465 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 RACGAP1Q9H0H5 632 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 MAGIXQ9H6Y5 334 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 SRA1Q9HD15 236 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms