RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ZNF718Q3SXZ3 478 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 SLC35F1Q5T1Q4 408 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF770Q6IQ21 691 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-218ENST00000489037 UGT2A3Q6UWM9 527 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 Q71RC1 249 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-218ENST00000489037 ZNF540Q8NDQ6 660 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 OR10G2Q8NGC3 310 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 CDADC1Q9BWV3 514 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 TSSK6Q9BXA6 273 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 DGCR6LQ9BY27 220 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 RPRD1BQ9NQG5 326 aaKnown RBP12.28□□□□□ -0.44
BRCA1-218ENST00000489037 PLEK2Q9NYT0 353 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 IL20Q9NYY1 176 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 TAAR3PQ9P1P4 343 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 BAIAP2Q9UQB8 552 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 POMPQ9Y244 141 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 HIVEP2P31629 2446 aa12.28□□□□□ -0.44
BRCA1-218ENST00000489037 SETD2Q9BYW2 2564 aaPredicted RBP12.27□□□□□ -0.44
BRCA1-218ENST00000489037 YLPM1P49750 1951 aaKnown RBP12.27□□□□□ -0.44
BRCA1-218ENST00000489037 LOC100509620A0A075B734 347 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 LY6HO94772 140 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 HLA-DQA2P01906 255 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 SCG5P05408 212 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 DAOP14920 347 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 ZNF250P15622 560 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 COX10Q12887 443 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 KCNMB1Q16558 191 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 TMEM154Q6P9G4 183 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-218ENST00000489037 LRP11Q86VZ4 500 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 MAPK1IP1LQ8NDC0 245 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 SDR9C7Q8NEX9 313 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 GJC3Q8NFK1 279 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 C4orf45Q96LM5 186 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 TSSK2Q96PF2 358 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
BRCA1-218ENST00000489037 RACGAP1Q9H0H5 632 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 MMADHCQ9H3L0 296 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-218ENST00000489037 TPK1Q9H3S4 243 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 ZNF556Q9HAH1 456 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 VNN3Q9NY84 501 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 ASH2LQ9UBL3 628 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 KLHL21Q9UJP4 597 aa12.27□□□□□ -0.45
BRCA1-218ENST00000489037 MPZL1O95297 269 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 ABHD16AO95870 558 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 IFNGP01579 166 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 ZNF823P16415 610 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 ALDH3B1P43353 468 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 CBX1P83916 185 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 PPP2R2BQ00005 443 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 MSMPQ1L6U9 139 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 OR6V1Q8N148 313 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 ZCCHC24Q8N2G6 241 aaKnown RBP12.26□□□□□ -0.45
BRCA1-218ENST00000489037 OR2T33Q8NG76 320 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 OR2AJ1Q8NGZ0 328 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 OR2T4Q8NH00 348 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 ABHD4Q8TB40 342 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 TEX47Q8TBZ9 253 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 UBASH3BQ8TF42 649 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 COG8Q96MW5 612 aa12.26□□□□□ -0.45
BRCA1-218ENST00000489037 PDP1Q9P0J1 537 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-218ENST00000489037 IGLV1-36A0A0B4J1U3 117 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 TCRBV3S1A0A5B6 114 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 OR6C68A6NDL8 312 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 ARRDC5A6NEK1 342 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 H3BN98 237 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 H3BSA7 217 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 BHLHE40O14503 412 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 FKBP6O75344 327 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 SOX14O95416 240 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 CLPTM1O96005 669 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 USF1P22415 310 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-218ENST00000489037 TUBG1P23258 451 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 WNT5AP41221 380 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 ERVS71-1P61550 626 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 PPP1CBP62140 327 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 TEKQ02763 1124 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 LOXL1Q08397 574 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-218ENST00000489037 MAD2L1BPQ15013 274 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-218ENST00000489037 VASH1Q7L8A9 365 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-218ENST00000489037 ZBTB46Q86UZ6 589 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 LNX2Q8N448 690 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 NPEPL1Q8NDH3 523 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 PROKR2Q8NFJ6 384 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 OR1F12Q8NHA8 337 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 SLC25A40Q8TBP6 338 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 DCLRE1CQ96SD1 692 aaKnown RBP12.25□□□□□ -0.45
BRCA1-218ENST00000489037 FEVQ99581 238 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 HINT3Q9NQE9 182 aaKnown RBP12.25□□□□□ -0.45
BRCA1-218ENST00000489037 TUBG2Q9NRH3 451 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 MYEF2Q9P2K5 600 aaKnown RBP12.25□□□□□ -0.45
BRCA1-218ENST00000489037 DNAJB9Q9UBS3 223 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 GRIP1Q9Y3R0 1128 aa12.25□□□□□ -0.45
BRCA1-218ENST00000489037 IGLV3-9A0A075B6K5 115 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 PLSCR5A0PG75 271 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 OR6C6A6NF89 314 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 RIIAD1A6NNX1 92 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 DCTN6O00399 190 aa12.24□□□□□ -0.45
BRCA1-218ENST00000489037 TPD52L2O43399 206 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms