RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PDLIM4P50479 330 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 HIST1H3AP68431 136 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 SCRN3Q0VDG4 424 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 FLOT2Q14254 428 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 GK3PQ14409 553 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 CCDC92Q53HC0 331 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 TMEM255AQ5JRV8 349 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 HIST2H3PS2Q5TEC6 136 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 RPL13AP3Q6NVV1 102 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 CD300LDQ6UXZ3 194 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 HIST2H3AQ71DI3 136 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 VASH1Q7L8A9 365 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 JAZF1Q86VZ6 243 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 SLC26A10Q8NG04 563 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 OR52E2Q8NGJ4 325 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 SYNPRQ8TBG9 265 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 SLCO4A1Q96BD0 722 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 MARS2Q96GW9 593 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 C4orf45Q96LM5 186 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 TPK1Q9H3S4 243 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 MS4A5Q9H3V2 200 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 MYOZ1Q9NP98 299 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 ASH2LQ9UBL3 628 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 LOC390937A0A1W2PQ73 354 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 NDUFS8O00217 210 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 SGCEO43556 437 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 RENP00797 406 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 HOXB6P17509 224 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 NOS3P29474 1203 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 AQP6Q13520 282 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 MEP1BQ16820 701 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 SPATA24Q86W54 205 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 LNX2Q8N448 690 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 SDR9C7Q8NEX9 313 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 OR10G2Q8NGC3 310 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 OR1J1Q8NGS3 322 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 OR4Q3Q8NH05 313 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 FEVQ99581 238 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 NIPSNAP1Q9BPW8 284 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 RPRD1BQ9NQG5 326 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 TAAR3PQ9P1P4 343 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 EIF3KQ9UBQ5 218 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 LHFPL6Q9Y693 200 aa13.65□□□□□ -0.22
CTDSP1-209ENST00000488627 ARRDC5A6NEK1 342 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 OR6C6A6NF89 314 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 RER1O15258 196 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 IGHV3-13P01766 116 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 NAT2P11245 290 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 DAOP14920 347 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 GSTM3P21266 225 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 GIFP27352 417 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 MPV17P39210 176 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 NR4A2P43354 598 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 KLF3P57682 345 aaPredicted RBP13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 COX10Q12887 443 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 RSPO1Q2MKA7 263 aaPredicted RBP13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 DNM1P34Q6PK57 102 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 RFPL4BQ6ZWI9 263 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 ZNF786Q8N393 782 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 CYB561A3Q8NBI2 242 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 OR52L1Q8NGH7 329 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 SLC25A40Q8TBP6 338 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 GIPC3Q8TF64 312 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 ZNRF4Q8WWF5 429 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 TSSK6Q9BXA6 273 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 FN3KQ9H479 309 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 PLEK2Q9NYT0 353 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 NDRG4Q9ULP0 352 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 HIVEP2P31629 2446 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 ABCA1O95477 2261 aa13.64□□□□□ -0.23
CTDSP1-209ENST00000488627 NIPBLQ6KC79 2804 aaeCLIP13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 A0A1W2PPW3 197 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 DOK2O60496 412 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 FKBP6O75344 327 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 SOX14O95416 240 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 HPXP02790 462 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 ERCC1P07992 297 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 USF1P22415 310 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 GGT2P36268 569 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 HTR5AP47898 357 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 CENPAP49450 140 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 ERFP50548 548 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 SELENOVP59797 346 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 PPP1CBP62140 327 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 GLO1Q04760 184 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 RIN1Q13671 783 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 ALKBH6Q3KRA9 238 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 ELFN2Q5R3F8 820 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 SPATA46Q5T0L3 261 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 C1orf174Q8IYL3 243 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 HS3ST5Q8IZT8 346 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 SLC37A3Q8NCC5 494 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 ICA1LQ8NDH6 482 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 OR1F12Q8NHA8 337 aa13.63□□□□□ -0.23
CTDSP1-209ENST00000488627 ABHD4Q8TB40 342 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms