RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RDH12Q96NR8 316 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 TMEM204Q9BSN7 226 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 HCAR1Q9BXC0 346 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 RNPEPL1Q9HAU8 725 aa13.66□□□□□ -0.22
C9orf3-219ENST00000488186 CISD1Q9NZ45 108 aaKnown RBP13.66□□□□□ -0.22
C9orf3-219ENST00000488186 EIF3KQ9UBQ5 218 aaKnown RBP13.66□□□□□ -0.22
C9orf3-219ENST00000488186 NKX1-2Q9UD57 310 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-219ENST00000488186 ROS1P08922 2347 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 HRNRQ86YZ3 2850 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-219ENST00000488186 IGHV2OR16-5A0A0B4J2B6 119 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF593O00488 134 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-219ENST00000488186 HS3ST1O14792 307 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 DOK2O60496 412 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 SPARCP09486 303 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 APEX1P27695 318 aaKnown RBP13.65□□□□□ -0.22
C9orf3-219ENST00000488186 GGT2P36268 569 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 ENTPD1P49961 510 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 KRTAP10-9P60411 292 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 TMEM154Q6P9G4 183 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 CORO6Q6QEF8 472 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 VHLLQ6RSH7 139 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 ARL9Q6T311 187 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 ERI1Q8IV48 349 aaKnown RBP13.65□□□□□ -0.22
C9orf3-219ENST00000488186 LINC00346Q8IVM7 164 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 OR8J1Q8NGP2 316 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 ZNRF4Q8WWF5 429 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 TRUB1Q8WWH5 349 aaKnown RBP13.65□□□□□ -0.22
C9orf3-219ENST00000488186 FBXW5Q969U6 566 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 ZMYND19Q96E35 227 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-219ENST00000488186 HRASLS5Q96KN8 279 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 INTS14Q96SY0 518 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 PITX2Q99697 317 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 WNT5BQ9H1J7 359 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 FAIMQ9NVQ4 179 aa13.65□□□□□ -0.22
C9orf3-219ENST00000488186 MRPL22Q9NWU5 206 aaKnown RBP13.65□□□□□ -0.22
C9orf3-219ENST00000488186 NDRG4Q9ULP0 352 aaKnown RBP13.65□□□□□ -0.22
C9orf3-219ENST00000488186 CADP27708 2225 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 LOC100130705A0A1B0GUX0 176 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 C5orf49A4QMS7 147 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 SHISA9B4DS77 424 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 M0R129 80 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 CASQ2O14958 399 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-219ENST00000488186 RER1O15258 196 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 CCL2P13500 99 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 CALCRP30988 508 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 HTR5AP47898 357 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 FABP6P51161 128 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 OGFRL1Q5TC84 451 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-219ENST00000488186 KRT80Q6KB66 452 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 UNQ6126/PRO20091Q6UXV3 157 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 SHFQ7M4L6 423 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 MYPOPQ86VE0 399 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-219ENST00000488186 ZNF584Q8IVC4 421 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 GID4Q8IVV7 300 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 CPEB3Q8NE35 698 aaKnown RBP13.64□□□□□ -0.23
C9orf3-219ENST00000488186 BBS1Q8NFJ9 593 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 OR6N2Q8NGY6 317 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 CYGBQ8WWM9 190 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 NEUROG1Q92886 237 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 ZNF75AQ96N20 296 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 MBOAT4Q96T53 435 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 VCX3BQ9H321 246 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 PLEKHF2Q9H8W4 249 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 WDR76Q9H967 626 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 FAM118AQ9NWS6 357 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 LHFPL6Q9Y693 200 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 HEATR1Q9H583 2144 aaKnown RBP13.64□□□□□ -0.23
C9orf3-219ENST00000488186 CCDC168Q8NDH2 2452 aa13.64□□□□□ -0.23
C9orf3-219ENST00000488186 A0A1W2PPR1 153 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 SLC22A31A6NKX4 558 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 COX5BP10606 129 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 RAD52P43351 418 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 KEAP1Q14145 624 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 RAB35Q15286 201 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 TAF13Q15543 124 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 ELFN2Q5R3F8 820 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 NXNL2Q5VZ03 156 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 TTC23Q5W5X9 447 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 LYPD4Q6UWN0 246 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 C20orf204Q6ZNR8 217 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 MEPCEQ7L2J0 689 aaKnown RBP13.63□□□□□ -0.23
C9orf3-219ENST00000488186 FBXL14Q8N1E6 418 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 DHRSXQ8N5I4 330 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 OR1F12Q8NHA8 337 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 SMAP2Q8WU79 429 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-219ENST00000488186 RFKQ969G6 155 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 TEAD3Q99594 435 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 APOL4Q9BPW4 351 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 DHRS9Q9BPW9 319 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 CYB5R1Q9UHQ9 305 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 GDF2Q9UK05 429 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-219ENST00000488186 COMMD3-BMI1R4GMX3 469 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 CSMD2Q7Z408 3487 aa13.63□□□□□ -0.23
C9orf3-219ENST00000488186 MYO9AB2RTY4 2548 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 SNTNA6NMZ2 147 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 E7EQL1 145 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 MPZL2O60487 215 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 ZNF35P13682 527 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 DNASE1P24855 282 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 ATP6V1E1P36543 226 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms