RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TOR3AQ9H497 397 aa14.81□□□□□ -0.04
SHROOM1-205ENST00000488072 POLR1DQ9Y2S0 133 aa14.81□□□□□ -0.04
SHROOM1-205ENST00000488072 RAI1Q7Z5J4 1906 aaPredicted RBP14.81□□□□□ -0.04
SHROOM1-205ENST00000488072 C12orf71A8MTZ7 269 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 PRR23D1E9PI22 279 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 E9PQ18 207 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 TLX2O43763 284 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 SELENOFO60613 162 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 PRR23D2P0DMB1 279 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 SLC2A5P22732 501 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 STOMP27105 288 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 GUCA1AP43080 201 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 LSM6P62312 80 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 NKX6-1P78426 367 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 EFNB1P98172 346 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 SNTB2Q13425 540 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 TRIP10Q15642 601 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 RSPO1Q2MKA7 263 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 MST1LQ2TV78 715 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 C3orf36Q3SXR2 165 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 SPATC1Q76KD6 591 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 SSX8Q7RTT4 187 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 LRP11Q86VZ4 500 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 ZNF611Q8N823 705 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 FBXW5Q969U6 566 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 AMELYQ99218 206 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 C9orf16Q9BUW7 83 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 GDF2Q9UK05 429 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 COMMD3-BMI1R4GMX3 469 aa14.8□□□□□ -0.04
SHROOM1-205ENST00000488072 LRBAP50851 2863 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 IQCMA0A1B0GVH7 501 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 C5orf49A4QMS7 147 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 C5orf63A6NC05 138 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 SGCEO43556 437 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 SYNGR3O43761 229 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 DOK2O60496 412 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 NDUFS7O75251 213 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 NGFP01138 241 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 SPARCP09486 303 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 NR4A1P22736 598 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 CDKN1AP38936 164 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 NAA10P41227 235 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 FABP6P51161 128 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 HIST1H3AP68431 136 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 GLO1Q04760 184 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 APOFQ13790 326 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 KEAP1Q14145 624 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 TMEM255AQ5JRV8 349 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 HIST2H3PS2Q5TEC6 136 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 HIST2H3AQ71DI3 136 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 ZNF101Q8IZC7 436 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 OR10H5Q8NGA6 315 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 EME1Q96AY2 570 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 PLEKHA8Q96JA3 519 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 DHRS9Q9BPW9 319 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 KCNS3Q9BQ31 491 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 CDH20Q9HBT6 801 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 PNRC2Q9NPJ4 139 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 CA10Q9NS85 328 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 CYB5R1Q9UHQ9 305 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 KLHDC2Q9Y2U9 406 aa14.79□□□□□ -0.04
SHROOM1-205ENST00000488072 ZNF593O00488 134 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 GLCEO94923 617 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 RAF1P04049 648 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 MRPL3P09001 348 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 GSTT1P30711 240 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 FMO3P31513 532 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 TTKP33981 857 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 APLNRP35414 380 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 HTR5AP47898 357 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 ADAM8P78325 824 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 PLP2Q04941 152 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 AQP6Q13520 282 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 ADIPOQQ15848 244 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 SPATA46Q5T0L3 261 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 RFPL4BQ6ZWI9 263 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 ZNF771Q7L3S4 317 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 NAA40Q86UY6 237 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 ERI1Q8IV48 349 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 NRG4Q8WWG1 115 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 CCL19Q99731 98 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 TRAF4Q9BUZ4 470 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 PLEK2Q9NYT0 353 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 DNAJC27Q9NZQ0 273 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 MYEF2Q9P2K5 600 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 KCNG2Q9UJ96 466 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 HEATR1Q9H583 2144 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 MAST4O15021 2626 aa14.78□□□□□ -0.04
SHROOM1-205ENST00000488072 TMEM129A0AVI4 362 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 OR6C6A6NF89 314 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 APOL3O95236 402 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 CLPTM1O96005 669 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 OR4A8P0C604 315 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 ZNF823P16415 610 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 GDI2P50395 445 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 PCBD1P61457 104 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 RPS7P62081 194 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 SCRN3Q0VDG4 424 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 AADACL4Q5VUY2 407 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 DPY19L4Q7Z388 723 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms