RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SPICQ8N5J4 248 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 OR8H1Q8NGG4 311 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 MRGPRX4Q96LA9 322 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 CCDC74BQ96LY2 380 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 SPSB2Q99619 263 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 GPN1Q9HCN4 374 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 OR52A1Q9UKL2 312 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 IGLV3-32A0A0A0MS00 114 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 LOC107986453A0A1B0GWG9 222 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 A0A1W2PNV4 684 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 SNRPGP15A8MWD9 76 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 G3V3Q6 166 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 H3BML4 177 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 SIGLEC6O43699 453 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 ZFAND5O76080 213 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 HTR2CP28335 458 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 PTGDSP41222 190 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 RBMS2Q15434 407 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 ZNF626Q68DY1 528 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 ZNF704Q6ZNC4 412 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 OR4C16Q8NGL9 310 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 OR13C3Q8NGS6 347 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 OR2T35Q8NGX2 323 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 SAP25Q8TEE9 199 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 CMKLR1Q99788 373 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 CRB3Q9BUF7 120 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 ATG5Q9H1Y0 275 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 MYOTQ9UBF9 498 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 WDFY4Q6ZS81 3184 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 CABIN1Q9Y6J0 2220 aa16.07■□□□□ 0.16
PDLIM7-207ENST00000486828 EFNA2O43921 213 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 CREBL2O60519 120 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 PRSS3P35030 304 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 DNASE1L1P49184 302 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 GUCA2AQ02747 115 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 SSBP1Q04837 148 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 PLPPR5Q32ZL2 321 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 LGALSLQ3ZCW2 172 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 FAM69BQ5VUD6 431 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 THOC7Q6I9Y2 204 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 LRFN4Q6PJG9 635 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 TMEM205Q6UW68 189 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 TEX261Q6UWH6 196 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 OR6M1Q8NGM8 313 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 RADILQ96JH8 1075 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 HEXA-AS1Q9H8Q6 139 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 SDHAF3Q9NRP4 125 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 SERINC1Q9NRX5 453 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 KLHL13Q9P2N7 655 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 MGAT4CQ9UBM8 478 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 ZNF69Q9UC07 566 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 WIF1Q9Y5W5 379 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 U3KQ87 197 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 FREM3P0C091 2139 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 TMEM269A0A1B0GVZ9 245 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 A0A1W2PQ72 361 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 MEGF11A6BM72 1044 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 GLYATL3Q5SZD4 288 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 TMEM244Q5VVB8 128 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 LCN10Q6JVE6 187 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 PPP1R3BQ86XI6 285 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 MEIOBQ8N635 442 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 TMEM105Q8N8V8 129 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 POC1BQ8TC44 478 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 RNF133Q8WVZ7 376 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 SORCS2Q96PQ0 1159 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 NKX3-1Q99801 234 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 SLC26A1Q9H2B4 701 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 METTL7AQ9H8H3 244 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 B3GNT2Q9NY97 397 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 EIF3KQ9UBQ5 218 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 C19orf25Q9UFG5 118 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 RPH3AQ9Y2J0 694 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 B3GALT1Q9Y5Z6 326 aa16.06■□□□□ 0.16
PDLIM7-207ENST00000486828 CACNA1CQ13936 2221 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 PYCARD-AS1I3L0S3 204 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 OR2J2O76002 312 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 H2BFMP0C1H6 154 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 UBCP0CG48 685 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 AKAIN1P0CW23 69 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 BIDP55957 195 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 MYBPHQ13203 477 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 TSSK4Q6SA08 328 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 BPHLQ86WA6 291 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 OR10G3Q8NGC4 313 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 OR51A2Q8NGJ7 313 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 SLC22A8Q8TCC7 542 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 IRF2BPLQ9H1B7 796 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 B3GAT1Q9P2W7 334 aa16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 MRPS18BQ9Y676 258 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-207ENST00000486828 SDK1Q7Z5N4 2213 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 GTF2F2P13984 249 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 GABRA1P14867 456 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 CORO6Q6QEF8 472 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 NHLRC1Q6VVB1 395 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 ZNF680Q8NEM1 530 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 GPX8Q8TED1 209 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 C11orf40Q8WZ69 217 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 GINS4Q9BRT9 223 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms